| New model in OGS2.0 | DPOGS204217 |
|---|---|
| Genomic Position | scaffold644:- 130853-136682 |
| See gene structure | |
| CDS Length | 1977 |
| Paired RNAseq reads | 806 |
| Single RNAseq reads | 2223 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007497 (0.0) |
| Best Drosophila hit | CG2118, isoform A (2e-163) |
| Best Human hit | methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (2e-161) |
| Best NR hit (blastp) | methylcrotonoyl-coenzyme A carboxylase 1 alpha [Glossina morsitans morsitans] (0.0) |
| Best NR hit (blastx) | methylcrotonyl-CoA carboxylase, alpha subunit [gamma proteobacterium NOR51-B] (5e-137) |
| GeneOntology terms | GO:0016874 ligase activity GO:0003824 catalytic activity GO:0005524 ATP binding GO:0008152 metabolic process GO:0009374 biotin binding GO:0005575 cellular_component |
| InterPro families | IPR013817 Pre-ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR013816 ATP-grasp fold, subdomain 2 IPR016185 PreATP-grasp-like fold IPR011054 Rudiment single hybrid motif IPR011053 Single hybrid motif IPR000089 Biotin/lipoyl attachment IPR011761 ATP-grasp fold IPR011764 Biotin carboxylation domain IPR001882 Biotin-binding site IPR005482 Biotin carboxylase, C-terminal IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal IPR005479 Carbamoyl-phosphate synthetase, large subunit, ATP-binding |
| Orthology group | MCL12159 |
Nucleotide sequence:
ATGTACGCCAATAGATTTTTAAAAATAAGTTCATTGAACTTACAAAATAGTGTGAGGTTT
AATCATGCTCATCAATTAAAGTCTGATATACAAAGGAGGCATATTGATAAAGTTCTGATA
GCAAATAGAGGAGAAATAGCATGCAGGGTGATGAGAACAGCTCGTAAATTAGGAGTTCGG
ACAGTTGCTGTATATTCAGAGGCTGATAAAAATGCTATGCATGTTGAAATGGCTGATGAA
GCCTATCACATTGGACCAGCGCCATCAACACAGAGTTATTTAAACACATCAAAGATACTG
GAAGTGGCTAAGAGATCAAAAAGTCAAGCTATACATCCGGGCTATGGATTTCTGTCAGAA
AATGTTGAATTCTGTAAGCAGTGCGCTGATGAGGGGGTAATCTTTATTGGACCACCCACT
TCAGCAATAAGGGATATGGGAATTAAAAGCACATCGAAAGCTATTATGTCAAATGCCGGA
GTCCCAATTGTCAGAGGATATCATGGAGAAGACCAAAGTAAAGAGAGGCTTCAGGCTGAA
GCTCAAAAAATTGGATTTCCGTTAATGATTAAAGCTGTGAGAGGTGGCGGAGGCAAAGGT
ATGAGAATAGCAATGACGGAAGCTGAATTTTTACCTCAATTAGAATCCGCTAAACGTGAG
TCTTTAAAGTCATTTGGTGATGAAAGTATGCTTCTGGAACAATACATCACAGACCCTCGC
CATGTAGAAGTGCAGGTTTTCGCAGATATGTATGGAAATGCCGTTCATTTGTTTGAGAGG
GACTGCTCAGTTCAAAGACGGCATCAGAAAATTATTGAAGAAGCTCCACATGCTGCAGCT
CGGCCTCTAGGTGGTCAGCATCACAAAGGTACTGATTTAGTCGAATGGCAGCTCCGTATA
GCCGCCGGCAAGCCGCTGCCTGTTTCACAAGAAGACATCGTCCGCCGCGGTCACGCCGTA
GAATGTAGGATATACGCTGAAGAACCACGAGCTGGGTTCTTGCCACGTGCTGGGACACTG
CACAGACTCACACAGCCAACACCGGAGGAAAACGTTCGAGTCGAGACGGGTGTCAGAGAG
GGGCACGAGGTGTCGGTGCACTATGATCCTATGATAGCCAAGCTGGTTGTATGGGGCCAG
GATAGACATGAAGCTCTCGCTAGGACTAAGAGAAAACTATCCGAATATCAGGTTGCAGGT
CTTGAGACGAACGTTAATTTCTTGCTGCGTCTGAGTGGCGCTAGTGCGTTCGTGGCGGGC
GACGTGCACACGGCTTTCATTCCACAGCACGAGGCTGAATTGTTTCCCCAATCCGACACG
GTGCTAAGTGAGGATAAAGCTATACAGGCTGCTTTAGGTTATGTTATCAAGTGCCAAAAA
GATTCAACTGCAAACAACTCCTGGAAGGGAATCTCAATAAAACCAACAGCGTGGCGTCCT
AATTATAATCTAGAGAAAATTGTTAATTTAAAATTCGATGACAAAGATACCAAAGTAACT
ATCAAGTACCAAAATGCACCTAACACATATCAAGTTAAAGTAAATGATGGCGAATGGAAG
TCAGTGGAGGGAGCATTGAAGGCAACTGAACAAGGGCTGAGGCTGGTATCAAAACTGGAT
GGCCGGACCAGCAACGTTGGCTTCTTGACACATGACAATGAAATACATGTGTACGATGAG
AACGGTCAAACAGTGTTACATTTGCCACAACCGAAGCATCAGGGACCATCCGGCCAAGAC
TCGACCTCATCAGCTAACGTCGCCTTCTCGCCAACAGCGGGGGTTATGGAAAAAATACTT
GTCAGCAAGGGAGACAAGGTTGTTAAAGGCCAACCAGTGTTTGTGGTTATAGCTATGAAG
ATGGAGTACGTTGTCCGCTCGCCGCGAGATGGCGTTGTATCGGAAGTGGCAAAATTTGTT
CAAGGAGACGCCGTCGGAAAGGGCGTTCAAGTCGTTACTCTTGAATCAGAAAGTTAA
Protein sequence:
MYANRFLKISSLNLQNSVRFNHAHQLKSDIQRRHIDKVLIANRGEIACRVMRTARKLGVR
TVAVYSEADKNAMHVEMADEAYHIGPAPSTQSYLNTSKILEVAKRSKSQAIHPGYGFLSE
NVEFCKQCADEGVIFIGPPTSAIRDMGIKSTSKAIMSNAGVPIVRGYHGEDQSKERLQAE
AQKIGFPLMIKAVRGGGGKGMRIAMTEAEFLPQLESAKRESLKSFGDESMLLEQYITDPR
HVEVQVFADMYGNAVHLFERDCSVQRRHQKIIEEAPHAAARPLGGQHHKGTDLVEWQLRI
AAGKPLPVSQEDIVRRGHAVECRIYAEEPRAGFLPRAGTLHRLTQPTPEENVRVETGVRE
GHEVSVHYDPMIAKLVVWGQDRHEALARTKRKLSEYQVAGLETNVNFLLRLSGASAFVAG
DVHTAFIPQHEAELFPQSDTVLSEDKAIQAALGYVIKCQKDSTANNSWKGISIKPTAWRP
NYNLEKIVNLKFDDKDTKVTIKYQNAPNTYQVKVNDGEWKSVEGALKATEQGLRLVSKLD
GRTSNVGFLTHDNEIHVYDENGQTVLHLPQPKHQGPSGQDSTSSANVAFSPTAGVMEKIL
VSKGDKVVKGQPVFVVIAMKMEYVVRSPRDGVVSEVAKFVQGDAVGKGVQVVTLESES