| New model in OGS2.0 | DPOGS204222 |
|---|---|
| Genomic Position | scaffold644:- 80583-85889 |
| See gene structure | |
| CDS Length | 1314 |
| Paired RNAseq reads | 1170 |
| Single RNAseq reads | 4239 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007500 (3e-136) |
| Best Drosophila hit | TMS1 (9e-91) |
| Best Human hit | serine incorporator 1 (5e-84) |
| Best NR hit (blastp) | membrane protein TMS1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | membrane protein TMS1 [Bombyx mori] (2e-153) |
| GeneOntology terms | GO:0016020 membrane |
| InterPro families | IPR005016 TMS membrane protein/tumour differentially expressed protein |
| Orthology group | MCL11860 |
Nucleotide sequence:
ATGGGAGCCGTGTTAGGAATTTGTTCAGCAGCACAGCTGGCCTGCTGCTGTGGCAGTGCT
GCGTGCTCATTGTGCTGCTCAGCATGTCCATCATGTGCCAATTCCACATCCACCCGACTG
ATGTACACTGTAATGTTGCTACTTGTCATGGTAGTGGCCTGCATCACTCTTGCTCCAGGA
TTACATGAACAGATGAAAAAGGTACCCTTTTGTGAAAATTCAACATCAATGGTGCCAGGC
ACCTTCAAAGTTGACTGTGATAATGCTGTTGGTTATTTGGCTGTTTATAGAATCTGCTTC
GCAACATGTCTCTTCTTTATACTGATGGCGTTACTCATGATTGGAGTGAGATCTTCCAAA
GATCCTAGAGCTGGTATTCAAAATGGGTTCTGGGGTATAAAATATCTTATTGTTATTGGC
GGTATCATAGGAGCTTTCTTCATACCAGAAGGATCATTTGCATCAACCTGGATGGTGTTT
GGAATGATTGGCGGCTTCTGCTTCATTGTTATACAGCTTATTTTGATCATTGACTTTGCT
CACTCTTGGGCCGAAAAATGGGTTTCCAATTACGAAGAAACACAATCTCGAGGTTGGTAC
TCGGCGTTGCTGTTGGCCATGTTGTCATGCTATGCGCTTACATTGACTGGCATTGTTTTA
CTTTATGTCTTCTATACTAAGCCAGATGGATGTGACCTATCAAAGTTCATCATCTCCTTC
AATCTGATCCTGGTTGTGGTAGCAAGCGCTATATCAATCCTGCCATCAGTCCAGGAATAC
CAACCCAGGTCTGGTCTGCTACAGTCAGCGGTTGTCTCATTGTATGTGATGTACCTGACT
TGGTCAGCCCTGTCCAACTCCGCTGCCCCATGTAATGCCAGTATCACTGACGAAAATGAG
TCGTCATTCGACAAGCAGTCTATCATTGGCCTGGTGATTTGGGTGTGCAGCGTCCTATAC
TCGTGCGTAAGGACAGCATCTTCCTCTTCCAAGATTACAATGTCTGAGCACATTCTGGCC
AAGGATGGAGCTACAGAAGGAGATGGCGGCGAGGCCGGCGCCAAGGAGACCAAGGTGTAT
GACAACGAAGATGACGCCGTCGCCTACTCCTGGAGCTTCTTCCACGTCGTCTTCGCTCTA
GCCACCCTGTATATCATGATGACACTCACCAACTGGTACAACCCGAGTTCTCAGCTGTCC
AAGTCTAATGTGGCGTCCATGTGGATCAAGATTACATCATCTTGGTTGTGCATCGGTCTA
TACATTTGGACCCTCGTCGCACCAGCAGTTCTGCCTGATCGCGACTTTAGTTAA
Protein sequence:
MGAVLGICSAAQLACCCGSAACSLCCSACPSCANSTSTRLMYTVMLLLVMVVACITLAPG
LHEQMKKVPFCENSTSMVPGTFKVDCDNAVGYLAVYRICFATCLFFILMALLMIGVRSSK
DPRAGIQNGFWGIKYLIVIGGIIGAFFIPEGSFASTWMVFGMIGGFCFIVIQLILIIDFA
HSWAEKWVSNYEETQSRGWYSALLLAMLSCYALTLTGIVLLYVFYTKPDGCDLSKFIISF
NLILVVVASAISILPSVQEYQPRSGLLQSAVVSLYVMYLTWSALSNSAAPCNASITDENE
SSFDKQSIIGLVIWVCSVLYSCVRTASSSSKITMSEHILAKDGATEGDGGEAGAKETKVY
DNEDDAVAYSWSFFHVVFALATLYIMMTLTNWYNPSSQLSKSNVASMWIKITSSWLCIGL
YIWTLVAPAVLPDRDFS