| New model in OGS2.0 | DPOGS211395 |
|---|---|
| Genomic Position | scaffold337:- 274350-287039 |
| See gene structure | |
| CDS Length | 4047 |
| Paired RNAseq reads | 5982 |
| Single RNAseq reads | 17414 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010852 (8e-98) |
| Best Drosophila hit | sec24 (0.0) |
| Best Human hit | protein transport protein Sec24B isoform a (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG1472-PA, partial [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Sec24B protein, putative [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0030134 ER to Golgi transport vesicle GO:0006888 ER to Golgi vesicle-mediated transport GO:0008270 zinc ion binding GO:0006886 intracellular protein transport GO:0005515 protein binding GO:0030127 COPII vesicle coat |
| InterPro families | IPR006895 Zinc finger, Sec23/Sec24-type IPR006900 Sec23/Sec24, helical domain IPR006896 Sec23/Sec24, trunk domain IPR002018 Carboxylesterase, type B IPR012990 Sec23/Sec24 beta-sandwich |
| Orthology group | MCL11724 |
Nucleotide sequence:
ATGGCTCAAGGCTTGTTTCATAAAGCTATTGCACAAAGTGGATCATGTCTTGCCGATTAT
GCAATAGATGTTAATCCTGTACAGAGAGCTTTTCGAGTTGGAAAGGTCCTTGGGAAGGAT
ACGACAGATCCTTATGAGTTACTCACATATTTACAAAGCTTGCCTGCAGAAAAACTTCTG
TATTTGACGTTAAAAACTGCAACTAAGAGAGAAAAACTTGGTGGTCTACCCATTGTTTTT
ACTCCCGTCGTAGAAAAGAGGTTTGGTGATAATGAAGTATTTTTGCCGGAAGACCCGTTA
GATATAATGTTATCTGGAAAATATAATCCTGTTCCTCTTATAACCGGATATACTTCATCA
GAAGGAGCAGTAACATTAAACGACGTGATACCAAAGCTGGACTTTATCAATAATTGTCCG
TCCCTGTTGGTGCCTAAAGACATTTATATAAAAATTACAGAAGACAAGGCTTTGGAATTT
GGTGAAAGAATCAAGCAATTCTATTGGGGTGACAGGGATTTAACAGCAGATGATGTTGAA
ATAATTGCTGATTTGCAGTCAGATATTCATTTTGTGATGGCAACATACAGGACAGCAGAT
TATTTTTCAAAATACTATTGCGAAGCCATGTCTCACATACCGAATCCGTATAACAATGCT
CCCGGGACCTACAACTCAAATCCTGCTATGTTTCAACAATTCAATCAAACGCTGACGAGC
CAACTGCCTCCGAAACAAGACACGAAACCAATCATTCCTACAAGCATTCAAGGGTTCAAC
CACCAAACGAATCCATATAATGACGAAAGTGCCAGCAGTTCGCCAGCTTTTAATAATACT
GGAATGATGCCCCTTCCAACAAGCTTACAGTCATCCCCCATGAGGCCCGTTAAGCCAGTG
CCAAGTCAACAGCAGGCTCAAAGCATTCAGAACATTCCACTGAGCTCATCCAGCCCACAT
TCAATGACCAACACTAACCAATCAAACTCTCCATATCATCCTCAATACCATCAAATCAAT
AATAATGCCCCACCTCTAATTCCTTCTAGTCTAAACAACCAGCCAAACATGAATGGTCCA
ATGAGTGCCCCAAATGCACTCCCTAATCAATATCCAGCAGCATCCAATTCATTCAGTCCA
GCTCCTATGAATCGCCCTCCGACAATTAATACTTTCAGTACAAATCAAAGTTATAGAACA
AATCACACATCCCAAACTTCATCTCCTCATGCTGTAAACCATCAGCCTAACGTTCCATTT
AATGGACCATCTGGTCCCAGAAATAGTCCTCTAACTACAGGACAGCAAGTTAATTCCCTC
ACATCTAGTATGGCAAAGTTACCGCCTATTTCTGGACCACCTGGGCCACCGAGAAGTCAA
AACAGTTTAATTAATGGACCGATGCAAGGCCAAGCTCCGCTTAATAACATGGGACCCCCA
AAAAATATGTCCCATGGGCCGTCTTCTCTACCCATAGGTCAACCGGGAGTCCCATTACGA
CCTACGGGACAAACAAACCAACAGCCACCCCTTATTAATAGTTCCCAACCAAACTTCATC
ACTGGACCACCTAGCGGCCCTCAAAGTATGCCAATCGGGCCAGGACAAGCTCCTCCTATG
GTACAACAGCCTAGACCTGGGCCAGCAAGCGGCCCATCTTCCATGACGAGTAGATATCCA
CAGATGCCTTACACGAATCTTAGCCCACAGCAACAAATGCAAGTCCAACAGAACATTGCT
AAACAGTTTCCCACACATAACTTGTACGACGTGAACCAGCAAGGAGGACAGCTCAGTGTG
ACTAAGCAGGGCTTCAACCAGCTTTGGGGTCATCAGATGGTGGACTTGATGCAGTGTAAG
CACATTCTGCCAGAATATCCCGAAGATCCACCGGAAATAAGGCTCGGACAACAGTTTGCT
GAGGCCAATAACTGCAGCCCAGAAATATTCCGTTGCACTGTCAACCGTATCCCGGAGACG
AATTCTTTATTGCAGAAGTCTAGACTGCCTCTCGGTATCCTGATCCATCCGTTCAAAGAC
CTCAATCATCTCCCCGTAATACAATGTACTACTATAGTCCGCTGCCGGGCGTGTCGCACC
TACATCAACCCCTTCGTTCACTTCGTCGACTCCAAGAGATGGAAATGCAACCTTTGCTAC
CGGGTCAATGAATTGCCCGAGGAGTTCCAGTATGACCCCGTGAGCAAGTCCTACGGCGAC
CCGTCCCGGAGGCCGGAGGTGAAGTCGGCGACGATAGAGTTCATCGCGCCCAGCGAGTAC
ATGCTGCGACCGCCGCAGCCGGCCGTCTACCTGTTCCTGTTCGACGTCTCGCAGAACGCC
AGGGAGTCGGGATACCTGCAGGTGGTGTGTGATACTCTGAAGTCTAACCTGGAACAGCTG
CCGGGGGACGCCCGCACTCAAGTCGGCTTCATCTGTTACGACGAGCACATTCACTACTAC
CTCATGAGTGACGGACTCTCCAAACCAAGGGAAATGACCGTTTTGGACGTTGAAGAGGTG
TTCCTCCCGTCGCCGGAGTCGCTGCTGGTGAACCTACTGGAGCATCGTGCGATCGTCGTG
GAGCTGCTGTCGGTGCTGCCCCGCCGGTACAGCTCGCCCACCGCCCCCGCCAGCGCCCTC
GGCCCGGCGCTCCAGGCCGCTTACAAGCTCATGGCCCCGACCGGAGGCAGGGTGACCGTG
TTCCAAACGTGTCTGCCTAACGTGGGCCCCGGCGCATTAGAGTCCAGGGAGGACCCCAAC
GCCCGCTCGGCCCAGGACGTGCGTCACCTGTCCCCGGCCACGGACTTCTACAAGCGGCTG
GCGTTAGACTGTTCGGGCGTGCAGGTGGCCGTGGATCTGTTCCTGCTCAGCTCGCAGTAC
TGCGACCTCGCTACCATCAGCGGTATGAGTAAGTTCAGCGCGGGTACGGTGCACCACATC
CCGCTGTTCCGCGCCAGTCGGCAATGGCAGGCGGAGCTGCTGACGCGCATGCTGTGTCGC
TACCTCACCCGCAAGATAGGCTTCGAGGCCGTCATGAGGGTCCGCTGCACGAGAGGGATA
TCCATCCACACGTTCCACGGCAACTTCTTCGTGCGCTCCACGGACCTGTTGTCTCTGGCC
AACGTGTCTCCGGACGCTGGGTTCGCTATGCAGCTCAGCATCGACGAGTCGCTGACGGAG
CTGCAGCACGTGTGCTTCCAGGCCGCTCTGCTGTACACCAGCAGCAAGGGTGAGCGTCGT
ATCCGCGTGCACACGCTGTCGCTCCCGGTGGCCAGTACGCTGCCGGATGTGTTGCACTCC
GCGGACCAGCACGCCGTCATCGGTCTACTCGCTAAGATGGCCGTGGACCGCTGCGTGTCG
GCGTCCATGTCGGAAGCGAAGGAGGCTCTGATGAACGCCGCAGTGGATATGTTGAGCGCC
CACCGCCTCGCCCACAGTTTGCCCACGGGTGACCAGAGCGCCTCCCTGCACGCGCCCTGG
TGCGAGTCTGATGACGGCGAACTGATACTGGCGCTGCTTAAACGGAAAGCATTCCGCACG
GGCACGTCGACTCGCCTGGACGAGCGCGTCTCCGACATGCTGTTCCTGAAGACCGCGCCG
CTGGCGAGTCTCCTGCGGGCCGTGCACCCCGACCTGTACGAGCTGCACACGCTCTCCAGC
CAGCACCAGCCGCCGCGGCTCCAGCTGTCCGCCGAGAGACTGAGCCTGGACGGCGCGTAC
CTCCTGGACGAGGGGGAGACCATGGTGATATACGTGTGTCGGGGGGTCAGCGCCGCCTGG
CTGTCCGAGGCGCTGGGGGTCAACTCGTTCGCGGAGCTGCCGGCCGAGGGTCGCGACCTG
CCGCACATAGACACCGGCCTCAACGACCTGCTGCACGGGTTCATCGACCGCCTCAACGAG
GACCGCCCTTACGCCGCCGGCCTGCTACTGCTCAGAGACGACTCGCCGTCCCGCCAACTG
TTCACGGAGCGCCTGGTGGAGGACCGCGTGGAATCCGCCTTCTCCTACTACGAGTTCCTG
CAACACCTCAAGAGCCAAGTGAAATGA
Protein sequence:
MAQGLFHKAIAQSGSCLADYAIDVNPVQRAFRVGKVLGKDTTDPYELLTYLQSLPAEKLL
YLTLKTATKREKLGGLPIVFTPVVEKRFGDNEVFLPEDPLDIMLSGKYNPVPLITGYTSS
EGAVTLNDVIPKLDFINNCPSLLVPKDIYIKITEDKALEFGERIKQFYWGDRDLTADDVE
IIADLQSDIHFVMATYRTADYFSKYYCEAMSHIPNPYNNAPGTYNSNPAMFQQFNQTLTS
QLPPKQDTKPIIPTSIQGFNHQTNPYNDESASSSPAFNNTGMMPLPTSLQSSPMRPVKPV
PSQQQAQSIQNIPLSSSSPHSMTNTNQSNSPYHPQYHQINNNAPPLIPSSLNNQPNMNGP
MSAPNALPNQYPAASNSFSPAPMNRPPTINTFSTNQSYRTNHTSQTSSPHAVNHQPNVPF
NGPSGPRNSPLTTGQQVNSLTSSMAKLPPISGPPGPPRSQNSLINGPMQGQAPLNNMGPP
KNMSHGPSSLPIGQPGVPLRPTGQTNQQPPLINSSQPNFITGPPSGPQSMPIGPGQAPPM
VQQPRPGPASGPSSMTSRYPQMPYTNLSPQQQMQVQQNIAKQFPTHNLYDVNQQGGQLSV
TKQGFNQLWGHQMVDLMQCKHILPEYPEDPPEIRLGQQFAEANNCSPEIFRCTVNRIPET
NSLLQKSRLPLGILIHPFKDLNHLPVIQCTTIVRCRACRTYINPFVHFVDSKRWKCNLCY
RVNELPEEFQYDPVSKSYGDPSRRPEVKSATIEFIAPSEYMLRPPQPAVYLFLFDVSQNA
RESGYLQVVCDTLKSNLEQLPGDARTQVGFICYDEHIHYYLMSDGLSKPREMTVLDVEEV
FLPSPESLLVNLLEHRAIVVELLSVLPRRYSSPTAPASALGPALQAAYKLMAPTGGRVTV
FQTCLPNVGPGALESREDPNARSAQDVRHLSPATDFYKRLALDCSGVQVAVDLFLLSSQY
CDLATISGMSKFSAGTVHHIPLFRASRQWQAELLTRMLCRYLTRKIGFEAVMRVRCTRGI
SIHTFHGNFFVRSTDLLSLANVSPDAGFAMQLSIDESLTELQHVCFQAALLYTSSKGERR
IRVHTLSLPVASTLPDVLHSADQHAVIGLLAKMAVDRCVSASMSEAKEALMNAAVDMLSA
HRLAHSLPTGDQSASLHAPWCESDDGELILALLKRKAFRTGTSTRLDERVSDMLFLKTAP
LASLLRAVHPDLYELHTLSSQHQPPRLQLSAERLSLDGAYLLDEGETMVIYVCRGVSAAW
LSEALGVNSFAELPAEGRDLPHIDTGLNDLLHGFIDRLNEDRPYAAGLLLLRDDSPSRQL
FTERLVEDRVESAFSYYEFLQHLKSQVK