| New model in OGS2.0 | DPOGS211420 |
|---|---|
| Genomic Position | scaffold337:+ 176567-181976 |
| See gene structure | |
| CDS Length | 2310 |
| Paired RNAseq reads | 2524 |
| Single RNAseq reads | 6478 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010900 (3e-116) |
| Best Drosophila hit | metal response element-binding transcription Factor-1, isoform C (6e-55) |
| Best Human hit | metal regulatory transcription factor 1 (2e-59) |
| Best NR hit (blastp) | PREDICTED: similar to metal response element-binding transcription factor-1 [Nasonia vitripennis] (2e-70) |
| Best NR hit (blastx) | GE20840 [Drosophila yakuba] (5e-73) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005622 intracellular GO:0005737 cytoplasm GO:0005634 nucleus GO:0046686 response to cadmium ion GO:0010043 response to zinc ion |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR013090 Phospholipase A2, active site IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL30659 |
Nucleotide sequence:
ATGGCCGCATGGCTCGGTGACAGCAGCCTCTCACATATCGGTACACGGAATAGCTTAGAA
TCTTTTGTTAACCAACATTTTAATATTGATAATAGTGTTGTTGATTGTGAGAAGTTTGAC
AGTGAGTCTGCAACTGTTCGTGTACGTAGTGTCGAAAACGGTGCCTTATTAGATACGTTA
CAAAGCGAAATAATTCCCAAGGACAAAAGAACGAATCATTTAATTGGAACAGCATCGGAT
AACAATGAAAAGCGGCCAGATGTACCTCAGACGAATATTGAGTTGGCAAAGTCCGTTATG
GATAAAAGTAAACGTAAGAACGATGACAACAGCAGTAGGTATCACTGCGAGTATGACGGG
TGCGAACGAACCTATAGTACCATTGGCAATCTACGGACACACTTGAAGACACACAAAGGT
GAATACAGGTTTGTGTGTTCGATACAGTCGTGTAACAAAGCGTTCCTGACCTCCTACAGC
CTTAAGATTCATGTCAGAGCCCACACCAAGGCCAAACCGTTTGCATGCAACATCGGCAAT
TGTAATAAAGCCTTTAATACTCTATATAGACTGAGGGCACATCAGAGACTCCACAGTGGA
GACACTTTTAACTGTAAAGCCACCGGCTGCACCAAGTTCTTTACAACGCTCAGTGATCTA
AAGAAACACATACGAACACACACACAGGAAAGACCTTACAAGTGCGTGACCACCGGTTGT
GGCAAATCGTTCACGGCGTCCCATCACCTCAAGGCACACGCTCGCACACATGTCCCGAGA
CACGCTACACATGTTACACTTACGCCACCAGCTGTGCCTCAAGTCACGCCACAAATCACG
TCACATATCTTGCCACAAGCGTCGCTCGCCACCTGTGGCTTACAGATGAAATCCGAAACA
TCGAAAGTATCATCAGATAATCCGAAAACGAACCAGGAGATGACCTGGGACAGTCTGTTG
GAGTCGTTCGGCAGGATCACCACCGAGTCCAACTCCACCGACGACAGCTTGGAAGACATC
ACCAGTGTGAACGCGCTCGCTAACAATAACTTGGACATCAACGAACTGCTCTTCGACAAC
TCGTCACACACGGACGTTAACCAGAACATGACGGATTACAGTCTGACTGCCATGGAAGAG
CTGTCCTTCGATAAAACAAGGAAAAACAACTGGACGGAAGTGACGGACTTGGACATAGCG
TTACCCTCGACCAGTAAGATGGAGGTGAAAACTGAGGCGATCCAACTGGCTCTGGCCAAC
GAAATAGAGGTCCAAGCGCCTTGGATAGACGTCACGGCCCTGGCGTCTTCCATACAAGAA
GCACCCGTCAGCATTAAAGACAAAACACCCGAAAACATATTCACCCTAGCAACATTCGTG
CCCACGCACATGCAGAGTTACATGGACCTGAACAGTGAGGCGCTGCCCACTGCGAACATC
ATCTCACAGGATTTCCTCGACACGCCCAACATCCTGGACGTCAGCGACAAGGTCTTCAAC
GATAGCGAGCTAGTTACAAACATTGATAAAATGGCGGACTTCCTCAAAAACGACGATCGG
TCTCTGAACACCCCCTCGCCCAAGATACAGCACGCCGTTGAAATAAATCCGTCGAGTTCC
GTCCTCTTCAATACGGACCTAACTCTGGAAGACACGCTACTGTTCGACAACGAACCGCCG
TCTGACATGTACGTGGTGCAAACGGAAAACGTGTTCGGTAGAAAAATGGAGAACCCGTTG
AAGAAGCTGACGTCGGATGTGGGGATATGTTCATGTGATAGTTGTGAGTGCGGCGCCGAC
AGCGGCGAGTGCAGGGCGTGCGGGGCGAAGGCCGAGGGCGGAGCACCCCACGAGGACAGG
TGCTCGTGTGTAGTGTGCGAGTGCGATCAGGACAAGATGAAGTGTGTGGCGGGGTGTGGG
AAAGCTACGGACACCCAGAACAACACCTTCCTAGACTATCACAAGCGACATAACAACTCC
AACCTCGAAGACTTGGGGGTTTTCGTGCACAACTGTGACAACTTCGCTCTCATCGACAGC
ATCAAGTGTTCCTGTAACCATGACCAGGAGTCGGTTGACACAGCGGGCTGCTGTCACACT
GAAGGCAAACAAGGCACATCCAGCAAGGCATGTGGTGGAGCCGAGTCAAGTCGAGCAACT
AGCAAGACATGCTGTAATAAAGATTCTGAGCACACGAACTCATGCTGCGTGACGATTTGC
TTCAAGAAGCTAGACGCCTTCAAAGATTTCTTAAACAGTAACGATCTATTAAATGCACTG
AAAGGGAACAGTCTGACCAGCAGCTCATGA
Protein sequence:
MAAWLGDSSLSHIGTRNSLESFVNQHFNIDNSVVDCEKFDSESATVRVRSVENGALLDTL
QSEIIPKDKRTNHLIGTASDNNEKRPDVPQTNIELAKSVMDKSKRKNDDNSSRYHCEYDG
CERTYSTIGNLRTHLKTHKGEYRFVCSIQSCNKAFLTSYSLKIHVRAHTKAKPFACNIGN
CNKAFNTLYRLRAHQRLHSGDTFNCKATGCTKFFTTLSDLKKHIRTHTQERPYKCVTTGC
GKSFTASHHLKAHARTHVPRHATHVTLTPPAVPQVTPQITSHILPQASLATCGLQMKSET
SKVSSDNPKTNQEMTWDSLLESFGRITTESNSTDDSLEDITSVNALANNNLDINELLFDN
SSHTDVNQNMTDYSLTAMEELSFDKTRKNNWTEVTDLDIALPSTSKMEVKTEAIQLALAN
EIEVQAPWIDVTALASSIQEAPVSIKDKTPENIFTLATFVPTHMQSYMDLNSEALPTANI
ISQDFLDTPNILDVSDKVFNDSELVTNIDKMADFLKNDDRSLNTPSPKIQHAVEINPSSS
VLFNTDLTLEDTLLFDNEPPSDMYVVQTENVFGRKMENPLKKLTSDVGICSCDSCECGAD
SGECRACGAKAEGGAPHEDRCSCVVCECDQDKMKCVAGCGKATDTQNNTFLDYHKRHNNS
NLEDLGVFVHNCDNFALIDSIKCSCNHDQESVDTAGCCHTEGKQGTSSKACGGAESSRAT
SKTCCNKDSEHTNSCCVTICFKKLDAFKDFLNSNDLLNALKGNSLTSSS