New model in OGS2.0 | DPOGS201835  |
---|---|
Genomic Position | scaffold22:- 175328-178814 |
See gene structure | |
CDS Length | 1284 |
Paired RNAseq reads   | 272 |
Single RNAseq reads   | 821 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006090 (1e-61) |
Best Drosophila hit   | CG11877 (2e-13) |
Best Human hit | beclin 1-associated autophagy-related key regulator (7e-10) |
Best NR hit (blastp)   | PREDICTED: similar to CG11877-PA [Apis mellifera] (4e-32) |
Best NR hit (blastx)   | PREDICTED: similar to CG11877-PA [Apis mellifera] (3e-21) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0000045 autophagic vacuole assembly GO:0034045 pre-autophagosomal structure membrane GO:0005776 autophagic vacuole GO:0005515 protein binding GO:0006914 autophagy GO:0005783 endoplasmic reticulum |
InterPro families   | IPR018791 Barkor |
Orthology group | MCL14785 |
Nucleotide sequence:
ATGGCGATGAGCTATCTAACTGAAAGCGAGGCTCCCCGGGACTTCAGGGTCTCCTCCACG
GAGAGCGATGGACATTATACAAAGTGTATTCTCTGTTACACCGTGAAAAAAAACTTTTAT
TGTGCTGAATGTGTTAAAAACGGAAACTTTGTACATTCCTCCGTTCCTTATTCGGATAGA
TATTCAGAGAAACAGGTGAAACTGATGCGTATGAAGATCAACAGACAGTACGTGTTAGAA
AGGTGTGAGATGTTGTTAGCACCAAAGATGAAGAAAGACATGCTTGTAACGGAAACGAAA
CAGTCCAGAGACAAACTTGACTTAATAAGATTAGCCATTGAACAACGAAGAAGTATCATC
GATTTACGGAAGAAGGAGTTGTTAGAACTAAAGGCATACAACAGTGAATTGAAATCAAAA
ATGCCAAGATACCAAAAGAGAGTGTCAAGTCTCGGAAAACATGCTCAAGCCCAACGACTA
GAATTACAAACTAAGATATGTTTATATAACGACCAGGCTCAGTCATTAGCGGCTTTAAGG
AGATCCAGAATCAGACAGCTAACACGATATATATTCCCTATATACATGAGCTACGATTCA
AGTGACAGTATAGAGGACATGGAGTTTGTGGGGTCAGACATCGAGGAGGACCCTCCCAAG
AGACCCCAGCTTCATATAGTTGCGCCCTGGATCGATATAGACGCCGACTACTCGCACATA
CAGGCCTGGGCCGTCTCTCAGAGTAAGGAGGCCACGTCGACGTCCTCGACGAGCGCGGCC
GCCCAGCGAGCCCGCGCGGCGCTCGGCCTGTCCGCTCAGCTCGTGGCGCTGCTGGCCTGG
ACACTGGACGTCAGACTGCCGCACGCTATAACACTCAGTGAGTACAGCGACCCCCGCAGC
TGGCGCAGCTGTGTGTGCCGCGCCCGTGCTGGTGCGGCTTCATTATCTGCGCGGGCGTCT
CTTCCTCCTCCCCCTCCCCCGCCGCTTGCCCCGCTCGCTCCTCTGGCCGCTCTTCACTCC
ATAGCGCTGGCCGCCGCGGCCGATGACCCCGAGCTGGGCACCGTGGAGCCGGGTCCGTCA
GTGTGGGCGGCGAGCGCGGCCTGGCAGGACACCAGCGCCCCGGACGACCTGGACGATCAC
GAGCCGCCCGAACATCTCACCTGGCCCGAGGATGGACAGATGGAGGAGGTGTCCGTGTCT
CCGCCGGTGGCTCCCTCGCTGGTGACGTCGGCCGCCGCCTCTCTGGCCTCTATCGCCTCC
GTGTGGCGCGGCTGGACGAAGTAA
Protein sequence:
MAMSYLTESEAPRDFRVSSTESDGHYTKCILCYTVKKNFYCAECVKNGNFVHSSVPYSDR
YSEKQVKLMRMKINRQYVLERCEMLLAPKMKKDMLVTETKQSRDKLDLIRLAIEQRRSII
DLRKKELLELKAYNSELKSKMPRYQKRVSSLGKHAQAQRLELQTKICLYNDQAQSLAALR
RSRIRQLTRYIFPIYMSYDSSDSIEDMEFVGSDIEEDPPKRPQLHIVAPWIDIDADYSHI
QAWAVSQSKEATSTSSTSAAAQRARAALGLSAQLVALLAWTLDVRLPHAITLSEYSDPRS
WRSCVCRARAGAASLSARASLPPPPPPPLAPLAPLAALHSIALAAAADDPELGTVEPGPS
VWAASAAWQDTSAPDDLDDHEPPEHLTWPEDGQMEEVSVSPPVAPSLVTSAAASLASIAS
VWRGWTK