| New model in OGS2.0 | DPOGS201843 |
|---|---|
| Genomic Position | scaffold22:- 40945-49864 |
| See gene structure | |
| CDS Length | 2610 |
| Paired RNAseq reads | 194 |
| Single RNAseq reads | 461 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006095 (5e-167) |
| Best Drosophila hit | wing blister (2e-116) |
| Best Human hit | laminin subunit alpha-2 isoform b precursor (2e-80) |
| Best NR hit (blastp) | PREDICTED: similar to wing blister CG15288-PB, isoform B [Apis mellifera] (3e-138) |
| Best NR hit (blastx) | PREDICTED: similar to wing blister CG15288-PB, isoform B [Apis mellifera] (2e-153) |
| GeneOntology terms | GO:0005605 basal lamina GO:0007267 cell-cell signaling GO:0005488 binding GO:0005604 basement membrane GO:0030155 regulation of cell adhesion GO:0005102 receptor binding GO:0045995 regulation of embryonic development GO:0030334 regulation of cell migration GO:0005606 laminin-1 complex |
| InterPro families | IPR000742 Epidermal growth factor-like, type 3 IPR002049 EGF-like, laminin IPR000034 Laminin B type IV IPR008211 Laminin, N-terminal IPR013032 EGF-like region, conserved site IPR006210 Epidermal growth factor-like IPR018031 Laminin B, subgroup |
| Orthology group | MCL10101 |
Nucleotide sequence:
ATGGGTCCTCACACGTTCATTAGTCCCGCCATACATGGCGTTGATTCCATCTCTTCCAAG
TATCGCAACGAGCAGAGTATAAAGAAAATGGAGCTTCTTCACGTCATTATCAAAGCGGGT
CCGTCGCCCCGTCCCCTGGCCTGGTCTTTAGAAGCCTCTACAACAGAGAATGGCGACGAC
TGGACGTTGATACGAGCGTTTGGAGATCGAGATCACTGTCGGAAGCTATGGGACCTTCGG
CCTGAACGAAGACGGAGAAAAGCTCGGGCGGCGAAGAGAGCTGGTCGGGCCGAGAAACCT
TCTTGCTCGACACAGTTCACTAGTCCACGTCCTTTGGAAAACGGAGAGATGCATGTGGGT
ATGGGTGAAGGGGTGACAGCTCGCCGGGTGCGAATCTCGTTTCGCGCAGCTCACTCCCCT
CTGAGGCATCAGTATTATACAGTCAGAGAACTCACCCTGGCAGCGAGGTGTCTGTGCCAT
GGACACGCTGACCACTGCATTGTGGACAATAAAAGTGCAAAATGTTCATGTCTGCATGGC
ACATGCGGCGCCCACTGTCAACGTTGCTGTTCGGGAGCACCCTGGCACGATGGTCAATCC
TGTGACATAACACAGGAGAAGAATGAGTGTTCCTGTGGAGAAAGAGGGGCCTGCTCATAT
GACGATACTGGCGCTATATTGTGCGTTAACTGTACAGATAACAGAGCCGGACCGCTATGT
AATCGTTGTCTCTTCGGTTACTACAATGTCTTCCCTGACGACCCTTGCCAACCTTGCGAT
TGCGATCCTGAAGGCTCAGATGGCACCTGTAAGTGGAATAAAAAACTTCATCAAATTGTC
TGCACCTGTAATCCAGGATTCACCGGCCTTCAGTGTGAAAAGTGTGAAAATCCAAACGCA
GTATTCCCAAATTGTTTAGTGGAGGTGACCACGGCAACATGTAAATGTGATCCGCGAGGT
ATTGTTGACCCTGGCAGGGTGTGCGATGACATTTGCGAGTGCAAGGTCAATGTGATCGGA
GAGAAATGTGATACTTGTGCCCCGGGACACTTCGGGTTGAGTTCATCTCTTCCGGGAGGC
TGTCGAGCTTGCTACTGCTCGCACGTCGCCTCTCATTGTGAATCAGATCCAAGACCCGGC
CCGGATATCGCGTTTCCTCTGGGTAACGAGTGGATGATAAGTGACAACAACAGTTCAGAG
ACGTTAGAACCTTCCGTAGACGACAAGGGAAAACCTTACCTTATAAGCTATGAGGTGGAG
GGTTGGGAGTCATATTACTTCGTCACTTCGTACCTCACTGGGCAGCAGTTGTCTTTGTAT
GGCGGAACGCTACTGTCTCAATTAGCTTGGGGTATCGCTCGAGGAGACTCGGGCGGAAGC
GCAAGTCGAGCTCCTGATTTTATACTCGTTGGAAACGATGGAATTAAGCTGACTTACGGC
AACACAAGCTATGAAACGCCTGGTCTGATAGAATTAGTGGCTCCTCTTGAAGAGGGAGGG
TGGTATTTGAATTCGGAGGTGGCTTCACGGTCGCAGCTTATGGACGTAATGAGTAACTTA
AAGTCAGTCATGATTCGAGCACACTTTCATTTTGATCAGGATGAGGTTCGTTTGGAGCGG
GCTCATATACGAGGTTCCGAGGGTGGTGTAAGAGAACTTTGTACGTGTGCTCCTCAACAC
GCGGGGACACAGTGCGAGACTTGTGCGCCGGGACACGTGCGACTAGAGCGAGCTCCCGGA
ACTTCCCCCGCCTTTGAGTGCGTGCCGTGTGACTGCAACATGCACGCTGATTGTGACTCT
GTAAATGGTCCTTGTGGCCCCTGCCAACATAATACCACCGGACCGCATTGCGAACGATGT
CTCCCAGGACATTACGGTAACCCCGTCCAAGGTGCTTGTAAACCATGCGCATGTCCTCTG
TATGAGCCGTCTAATAACTTCAGTCCTAACTGCGCCTTGGCGGCGGCTGTTGGTGATGAT
TATGTGTGCACACAATGCCCGGATGGATACGCTGGAGATCACTGCGAGATATGCGACTCG
GGCTACTGGGGTTCGCCGGCTACAGTGGGAGGCTCGTGTCAGCCCTGTGATTGCGGTGGA
GGTCCGTGTCATCCGCAGTCGGGCGCCTGCCTCGTGTGTCCGCCACATACAGAGGGGGAG
CGCTGCGATCAGTGCCAGGAGGGCTATTGGTCCGGTGGAGACAATGGGTCCTGTATTGCA
TGTGGATGTGGATTGGGAGCGCTGTCAACGGCGTGTGACCCTCGCGCTGGGCACTGCGCC
TGCGCACCTGGCTGGACGGGAAGAGCCTGTAATGTCTGCGCCACAGGACACGGCAACGTG
TCGGCGGGCTGTCCCCTGTGTGCGTGCGGCGCGGGTTCGTCAAGTGCAATGTGTGGGACG
GAGCACGGGGAGTGTCCCTGTATGTCCGGGGCCGCTCCGCCTCGATGCGACACGTGTCTA
GAACAGCACTACAACCTGTCCACTACTGGCTGTTTGAGCTACCTTCAATACCAGGTTCAA
AGTGGCATGCGGACTTTGCAATATGAAGTCCTCATCCACCTCAGCGCCACATTTTTGATA
GTTTCAATCCACAACAAATTATTGCAGTGA
Protein sequence:
MGPHTFISPAIHGVDSISSKYRNEQSIKKMELLHVIIKAGPSPRPLAWSLEASTTENGDD
WTLIRAFGDRDHCRKLWDLRPERRRRKARAAKRAGRAEKPSCSTQFTSPRPLENGEMHVG
MGEGVTARRVRISFRAAHSPLRHQYYTVRELTLAARCLCHGHADHCIVDNKSAKCSCLHG
TCGAHCQRCCSGAPWHDGQSCDITQEKNECSCGERGACSYDDTGAILCVNCTDNRAGPLC
NRCLFGYYNVFPDDPCQPCDCDPEGSDGTCKWNKKLHQIVCTCNPGFTGLQCEKCENPNA
VFPNCLVEVTTATCKCDPRGIVDPGRVCDDICECKVNVIGEKCDTCAPGHFGLSSSLPGG
CRACYCSHVASHCESDPRPGPDIAFPLGNEWMISDNNSSETLEPSVDDKGKPYLISYEVE
GWESYYFVTSYLTGQQLSLYGGTLLSQLAWGIARGDSGGSASRAPDFILVGNDGIKLTYG
NTSYETPGLIELVAPLEEGGWYLNSEVASRSQLMDVMSNLKSVMIRAHFHFDQDEVRLER
AHIRGSEGGVRELCTCAPQHAGTQCETCAPGHVRLERAPGTSPAFECVPCDCNMHADCDS
VNGPCGPCQHNTTGPHCERCLPGHYGNPVQGACKPCACPLYEPSNNFSPNCALAAAVGDD
YVCTQCPDGYAGDHCEICDSGYWGSPATVGGSCQPCDCGGGPCHPQSGACLVCPPHTEGE
RCDQCQEGYWSGGDNGSCIACGCGLGALSTACDPRAGHCACAPGWTGRACNVCATGHGNV
SAGCPLCACGAGSSSAMCGTEHGECPCMSGAAPPRCDTCLEQHYNLSTTGCLSYLQYQVQ
SGMRTLQYEVLIHLSATFLIVSIHNKLLQ