| New model in OGS2.0 | DPOGS201898 |
|---|---|
| Genomic Position | scaffold22:+ 138824-143600 |
| See gene structure | |
| CDS Length | 2067 |
| Paired RNAseq reads | 1034 |
| Single RNAseq reads | 2383 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006072 (6e-110) |
| Best Drosophila hit | CG7456 (6e-34) |
| Best Human hit | conserved oligomeric Golgi complex subunit 4 isoform 1 (2e-40) |
| Best NR hit (blastp) | PREDICTED: similar to CG7456-PA [Apis mellifera] (2e-97) |
| Best NR hit (blastx) | AGAP008875-PA [Anopheles gambiae str. PEST] (5e-40) |
| GeneOntology terms | GO:0048213 Golgi vesicle prefusion complex stabilization GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0007030 Golgi organization GO:0017119 Golgi transport complex GO:0005515 protein binding |
| InterPro families | IPR013167 COG4 transport |
| Orthology group | MCL12229 |
Nucleotide sequence:
ATGTCCTTAACTTTACTATTAGAGAAATATGATGTTTCTACAGAGGAAGGTTTACAGAAG
GCTTTGAATGAAATTGAAAAAGAAGAGTGTGAAGTGGATGAGGCCTTATCCAGTGCTCTG
TCTCGCGCCTGCACTTTAGAAGGACGACTGCGTTCCGCCAGTCAGGCGTACTCAAAATTG
GGAGAAGTCAAGAACGATGCTCAGGTGGCGGCAGACATGGTAGACAAGACTGCTGGTTTA
GCAAGAGATGTCAGTGCTAAAGTGAGGCAACTGGACCTTGCTAGATCTCGTGTTGCAGAA
TGTCAGAGAAGAGTCCATGACCTCATAGACCTCAGGGTCTGTAGTGCTGGAGTTGAGGCT
GCCATCAAGGCTCAGGATTATGAAACTGCGGCTGGCCATGTTTCTCGTTTCCTGAGTATG
GAGCCGGGGTCGGTGGCGGCCGCGAGGGCGAGGGGTCCCGACCCCCGGACCGACATGGAC
GCCGCGGCCCGCACCCTGAGGGATCAGCTCAGGATCAAGTTCGAAGAGGCTGCGAAGATA
GAAGACGACGCGTCCGTGGAGAGGCTGTTCAGACTGTTCCCTGAGATAGGACGCGCCGAG
GAAGGGGTGGAGCTGCTCACCGGATACCTCGCCGCGCAGCTCGAGGCGTCGCTCCGCCGC
GCCGGCCAGTCCCGCAGCGGAGGCGCAGTGTTCGCGGACACCCTCACCAGAGCCCTGGAG
ACCGCGGCGGCCGCCGTGGAAAGACTCCGGAGACTCCTCCCGCCCTCGCGACATATGCTG
CTCGTACAGGGACTGAGGGCGCTCCAGCCGACCGTGTGTTCGTCCGTCCGTCGTATATGG
AGCGAGCTGTCTCCTCGCCCTCGGCCTCGACCTCCGCACGATAAGCCCGACCCCCTCCGC
CTGGAGCCCGCCCTCTCGGAGCTGGCGCTAGCTCTGTCCAGGATGCAGCTCTACTTCAAC
TTCCTGAGACGTCGCCCCGAGCACGACGCCAGCCTGACCGACGACGCCAGGAGGGAGAGC
GTGCGGGCCATCGACAGGATCATAGCGGAGTGCGACATGACGCTCACCGCGCAGGAACAT
CTGGCGCACTACCTCGAGCTGGAGAGGTACTTCCTGGAGGAGAGCGTCAACAAGGCCATG
AAGCTGTCCGCCGCCAGCTGCGACGACCCCGGCTCCAGCCTTGTGGACGACGTGTTCTAT
ATCACGAGGAAAGTCATCAGGCGCGCGATATCCACGGGCAGTGTGGACGGGATGTGTGCC
GTCATGAACGAGGCGGGCGCGCAGCTGGAGCGAGCGGCGCGGGCGCTGCGCAGGGGGCTC
GCGGTCACCCCGCACGACGTGCTGCCGCTGGCGCCGCCCCGGTCCACGCCCGCGCCCGCC
CCGCCCGAGGCCGAGCTGTACCTGGCGCACCTGGCCGAGGCCGAGGCGGGGGCGGAGTGG
ACGGAGCGACTAGCCACCGAGGCCTGCTCGGAGGCGGAGGCGGCGGCCCGGGCGTCGGCC
GGGGCGTGCGACAAGCTGCGCTCGTGTGCGGCGGGCCTGTCGGGCGCGGCGGCGTCCTTC
CGCGCCGTCACCGAGCTGGGCGTGTCCTCGCTGAGGGCGGCGCTGCTCCCGGCCGTCACC
GCCTGGGGCGACGCGCTCGTGGACCCGGACTCGGACGTCGATGAGCTGGCGGAGGAGGCC
GGGGCGCTACCGGCCGCCTTGGACACGCTGGCCGAGGCGCTCCGCGGGCGACTAGCGTCG
GCCGGGGACCTGCTGCTCACCGGGGTGCTGGACGACCTGCTCACGCGAGCACACAGGACG
CTACTTAAAAACACCTACGACAGGCGAGGAGGCCTGGCGACGGAGCGTCGTTGCCGCCGA
GTCTCCCTGTGGGCGGGCACGGGAGCCCCGGCAGCCCGGGAGAAGGCCCGCGCCCTGAGC
GCCGCCGCAGCGCTGCTGGCGCTAGAGAGGCTGGAACACGCGCCGGACGCCCTGCCGCCC
GCAGCGCTCACACCCGCCGCCGCCAGGGACGTGCTCGCGAGACGATCCGACTTCAAGCTG
GAGGACATCAAGCGTCTGAAGCTGTGA
Protein sequence:
MSLTLLLEKYDVSTEEGLQKALNEIEKEECEVDEALSSALSRACTLEGRLRSASQAYSKL
GEVKNDAQVAADMVDKTAGLARDVSAKVRQLDLARSRVAECQRRVHDLIDLRVCSAGVEA
AIKAQDYETAAGHVSRFLSMEPGSVAAARARGPDPRTDMDAAARTLRDQLRIKFEEAAKI
EDDASVERLFRLFPEIGRAEEGVELLTGYLAAQLEASLRRAGQSRSGGAVFADTLTRALE
TAAAAVERLRRLLPPSRHMLLVQGLRALQPTVCSSVRRIWSELSPRPRPRPPHDKPDPLR
LEPALSELALALSRMQLYFNFLRRRPEHDASLTDDARRESVRAIDRIIAECDMTLTAQEH
LAHYLELERYFLEESVNKAMKLSAASCDDPGSSLVDDVFYITRKVIRRAISTGSVDGMCA
VMNEAGAQLERAARALRRGLAVTPHDVLPLAPPRSTPAPAPPEAELYLAHLAEAEAGAEW
TERLATEACSEAEAAARASAGACDKLRSCAAGLSGAAASFRAVTELGVSSLRAALLPAVT
AWGDALVDPDSDVDELAEEAGALPAALDTLAEALRGRLASAGDLLLTGVLDDLLTRAHRT
LLKNTYDRRGGLATERRCRRVSLWAGTGAPAAREKARALSAAAALLALERLEHAPDALPP
AALTPAAARDVLARRSDFKLEDIKRLKL