| Genomic Position | scaffold1417:- 18435-24033 |
|---|---|
| See gene structure | |
| CDS Length | 1113 |
| Paired RNAseq reads | 15 |
| Single RNAseq reads | 45 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002401 (3e-61) |
| Best Drosophila hit | quemao, isoform B (6e-63) |
| Best Human hit | geranylgeranyl pyrophosphate synthase (7e-49) |
| Best NR hit (blastp) | geranylgeranyl pyrophosphate synthase [Aedes aegypti] (2e-68) |
| Best NR hit (blastx) | geranylgeranyl pyrophosphate synthase [Aedes aegypti] (1e-64) |
| GeneOntology terms | GO:0004337 geranyltranstransferase activity GO:0004161 dimethylallyltranstransferase activity GO:0004311 farnesyltranstransferase activity GO:0008299 isoprenoid biosynthetic process GO:0008354 germ cell migration GO:0035050 embryonic heart tube development |
| InterPro families | IPR008949 Terpenoid synthase IPR000092 Polyprenyl synthetase IPR017446 Polyprenyl synthetase-related |
| Orthology group | MCL10887 |
Nucleotide sequence:
ATGACGGCTTTAGGTGACATTAGCGCCATCTACATATCCGGTTGTGAATTACTGCAGACC
AATTGTTTCCGGTCAGCCGCCTTTTTATTGTCGCTACCGGACTATAATAAAAAAGCGACC
GCACTAGCGTTCTACACATTCGCATTCAGTCCTTTGGGGAATAGTCAGTGCCTGGATGGT
GAAGGATACGTAATTGCCCGAACACCGCGACTGGAAGTCAGAATAGTATGCTGTCAGGAA
CTTCTAGCACCATCTCGACACGTAGAGACAGTTCTAGAAAAACTATTCATCAACAAAATG
GTTCGTGCATTCAACTACTGGTTGAAGCTCTCGGAGGAAGACTTCCTCAGAGGAAACTAC
GTAACGGATACAGCTGTGAAAGGAATCTTCTTGATTGACGACATTCAAGACAGCTCGACC
ATTAGACGTGAGGTTCCAACAGCTCACCTTATTTATGGAGTCCCCTTGACTTTAAACAGC
GCCCTGCTAAATCTAGCAGAAGCTTCGCAAAAGGCTTTTGAGTTGATTCCCAACGGAGTG
GGCGCTAAACTAGTAGCTGATCAACTACATGAAATGTGGACTGGACAGGGCACTGAAATC
TATTGGATCGACAATTTCATTTGTCCAACCGAGAAGCAATACGAAAAAATGTCTCGACAA
AAAACGGGAGCGTATATTGTGCTTGTAATAAAGTTATTACAACTCTTGAGCGACGATCAA
AGGGATTACGATAAGTTACTGTCCATACTTGGGTATTACTCTCAACTCCGAGATGATTAT
TGTAATCTCCGGTCTCACGAGTTGAACAAAGATGGGAGATTCTGGTTAGATTTAACTGAG
GGTAAATATTCATTACCAATAATACATGCGGCGAAGACTCCTTTTGGACCCGAAGTATTG
CATATTTTACGGAAGCGCACAAGTGATATCAAATTGAAGAAATATTGTTTATCTTTATTG
GAGAAGGCGGGCAGCTTACAGTACACGAGAGACAGACTGGTCGAGTTGGATCGCGAGGCG
AGGGCTGAGATGACACGTTTAGGTTACAACCCTTTGATGGAGAAAGTTTTGGACGGGTTA
AACAGCTGGAAGGACGATAAAATGTTTACTTAA
Protein sequence:
MTALGDISAIYISGCELLQTNCFRSAAFLLSLPDYNKKATALAFYTFAFSPLGNSQCLDG
EGYVIARTPRLEVRIVCCQELLAPSRHVETVLEKLFINKMVRAFNYWLKLSEEDFLRGNY
VTDTAVKGIFLIDDIQDSSTIRREVPTAHLIYGVPLTLNSALLNLAEASQKAFELIPNGV
GAKLVADQLHEMWTGQGTEIYWIDNFICPTEKQYEKMSRQKTGAYIVLVIKLLQLLSDDQ
RDYDKLLSILGYYSQLRDDYCNLRSHELNKDGRFWLDLTEGKYSLPIIHAAKTPFGPEVL
HILRKRTSDIKLKKYCLSLLEKAGSLQYTRDRLVELDREARAEMTRLGYNPLMEKVLDGL
NSWKDDKMFT