| New model in OGS2.0 | DPOGS215430 |
|---|---|
| Genomic Position | scaffold2060:- 22123-23076 |
| See gene structure | |
| CDS Length | 687 |
| Paired RNAseq reads | 20 |
| Single RNAseq reads | 78 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007348 (2e-75) |
| Best Drosophila hit | jetlag, isoform B (1e-38) |
| Best Human hit | F-box only protein 37 (7e-20) |
| Best NR hit (blastp) | AGAP009335-PA [Anopheles gambiae str. PEST] (2e-47) |
| Best NR hit (blastx) | AGAP009335-PA [Anopheles gambiae str. PEST] (1e-49) |
| GeneOntology terms | GO:0045475 locomotor rhythm GO:0043153 entrainment of circadian clock by photoperiod GO:0048512 circadian behavior |
| InterPro families | IPR001611 Leucine-rich repeat IPR006553 Leucine-rich repeat, cysteine-containing subtype |
| Orthology group | MCL18291 |
Nucleotide sequence:
ATGTATTTCGCAAAACTTACAACACTGAAGCTCATAAATAACGGATTTTCTCCACACACA
TTTCAAGTCTTCGCTGTGAATTGTACTAGATTAAAAGTTCTTAATCTCAGTAGGTGTGCT
TCCATCACTGACGCGGAATTGATTCCTATACTACTCAACAATAAAGGGCTGATTAGTTTA
AATTTAAGTCAATGTAAAAATTTGTCTGCTAAATGTTTACAGCCTGCGATATTGTACTGT
AGTAATTTGCAAGTCTTAAAGCTGTCTAAATGTTATTGGCTGACAACAGGAGCAATGGAG
GCCCTGGCACTTCACCAGAGTTTACTGGAAGAAGTGGATTTAGCACACTGTGCTGCAATA
TCAGAAGGTTGCATACTTATATTTATTAAGAAATTTAGAAATTTGAAGACTCTGAATTTA
GAAGGCAATAAACAGATCACCGACAAGTGTCTGCACACTATGGCCAAGTACAGCAAATCT
TTAAAACTACTCAACTTAGGAGGCTGCTCAGAAATTACAGATAAAGGTGTAAGGGCTCTC
GCATTCAACTGTCCAAAATTGGAAGGCCTTCTTGTGCGAGGTTGTACAAAAGTTACAGAG
AATAGTTTGCAACTGATGAGAAACAGAGTCCATTTGGATAGAAGACCGACGGAACCCGTT
CCAGCTCCGGAGTTTGTAGCAATTTAA
Protein sequence:
MYFAKLTTLKLINNGFSPHTFQVFAVNCTRLKVLNLSRCASITDAELIPILLNNKGLISL
NLSQCKNLSAKCLQPAILYCSNLQVLKLSKCYWLTTGAMEALALHQSLLEEVDLAHCAAI
SEGCILIFIKKFRNLKTLNLEGNKQITDKCLHTMAKYSKSLKLLNLGGCSEITDKGVRAL
AFNCPKLEGLLVRGCTKVTENSLQLMRNRVHLDRRPTEPVPAPEFVAI