| Genomic Position | scaffold5477:+ 248-3674 |
|---|---|
| See gene structure | |
| CDS Length | 1986 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 4 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001518 (3e-15) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] (8e-45) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_74839 [Branchiostoma floridae] (6e-42) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL20843 |
Nucleotide sequence:
ATGAAAGTAATGGATGAAGAAACTTTGATAAAGATCTGTAAAACAGCTTTTTCACCAGAA
GAAATTTTGGCGGCAAAAAAGTTGTTATTTGACGCTGTACCTACAAAACGCATGAAGGTG
AGAAAAAAAGAGGAAAAATCTAAAAGAGACTTGGAAGATATTCTTGACCTTTTAAAAAGT
ACGGACGCGACGGATCCGGAGAGAATCCCGATTTTTGTTGCTAAAGAATTACACAGATTG
CCACCAATTACTTTCGACCACGTAGACGTTACGCGGTTATTGAGAGATTTAAACTTGCTG
CGGGAACACTTAAATGAAATAAGAAATGATTGTTTTCTCAAAAACAACTCCGTGAAATTC
TTGAAACATCGCGGGAACATCCAAGTTTTACGGCAGACAGCGGACCGATGGATGACTGAG
ACGGCGGTACAATGTCAAGGACGCGGAAATATAAATCTAATGGACACCTGTGAAGTTAGT
ATGACGAATTCAACCAAACGTCAAGTTAATGGATGCGCCGTCTCTGTTGCGCAGCCGAGT
GGCAGCGACAAGCATACAACGCTGCAACAACGCACGAGCGAAGCCGATGACAATTATACG
ACGACAACGATTACCGATGATGTCGCGTGCGCCGCGCGCGGAGCGTCGTCAATGACTAAT
GTGAAAGAAAGGGAGCGCACGATGGCCGACATTGAGTTGGAAAATGTGTACAAAAATATT
GTCACTATCCTTTCTGAATCCGCAACTGTAACATATAAAGAAAATAAAACGAGGAGCAAA
AAGGGCTACGTGACTGGGTGGAATAAGTACGTTCGAGAGGCCCATTGTGAGGCTCGATCG
AAGTATCAACTATGGTTGCTGTATAATAAACCTAGATCTGGAAAAGTTTGGGACGAGCTA
TGTGAGAGTCAAAAAATTTTTAAAAGTAGATTAAGATGGTGTCAAAATCATAAAGACGAA
ATTAAAATGGATTTAATTGCTTCGCACAGATCAGCTAAAGATTTTTCAAAATTTTGGAAA
GCAACCAATAGCTTGAATGTTCGACCGAGCCTACCAGTGTGTGTCGACGGCCAGAATAGT
CAAAAGGATATCGCTAATTTGTTTAAAAATCATTTTAAAGTATCTTCTCCCCTGGGGCCA
TCTGTGAGGGGAGTCGATGCTGAGGTTTGTCGTGATAAAGAACTTCTGTGTTTCTCAGCT
AAACAGGTTTCTGAGGTGATAAATAAAATGACCAGGGGAAAATCGCCTGGACACGACGGC
CTCAGCATTGAACATTTGAAATATGGGGGAATACACTTACCCAGAGTACTGGCAATGTTT
TATTCCCTATGTGTTAGTCACTCATACATCCCAATAGAAATTATGAAAACAATAGTGGTT
CCTATTGTTAAAAATAAAACGGGTAACATTGCAGATCGATCCAATTATAGGCCCATCTCA
CTTGCTACCATAATTGCTAAAGTAATGGATAGTCTGCTTGATAAGATACTTAACAGTAAG
CTTACCTTTCACGACGCACAGTTTGGGTTTAAACCTGGACTTTCTACAGAAAGCGCAATA
TACAGTTTGAAGCAGACTGTCCAGTACTATACTAGCCGTAAAACGCCGGTTTATGCCTGT
TTCCTTGATCTCTCCAAGGCCTTCGATCTAGTGTCTTATGACCTGCTTTGGGAGAAGATG
GAGAGAGCGGGCGTAGAGCCGGAGGTGCTCCGGGTTATGCAGTTTTGGTATGCACATCAA
ACCAATAATGTCAAATGGGGTAAGGAACTCTCAGACTCGTATAGGATGCAGTGCGGGGTA
AGGCAGGGGGGACTGACCTCCCCAAAGCTCTTCAATCTATACGTGAATGATTTGGTAGTG
GAACTTAGTAAGACACCAGTCGGCTGTTGGATAGACGGCATATGCGTAAATAACCTTAGT
TATGCCGATGACATGGTTTTGCTGGGTCTCTGTTTACAAAGAGAGACCAAGTGCACCTGC
ATTTAA
Protein sequence:
MKVMDEETLIKICKTAFSPEEILAAKKLLFDAVPTKRMKVRKKEEKSKRDLEDILDLLKS
TDATDPERIPIFVAKELHRLPPITFDHVDVTRLLRDLNLLREHLNEIRNDCFLKNNSVKF
LKHRGNIQVLRQTADRWMTETAVQCQGRGNINLMDTCEVSMTNSTKRQVNGCAVSVAQPS
GSDKHTTLQQRTSEADDNYTTTTITDDVACAARGASSMTNVKERERTMADIELENVYKNI
VTILSESATVTYKENKTRSKKGYVTGWNKYVREAHCEARSKYQLWLLYNKPRSGKVWDEL
CESQKIFKSRLRWCQNHKDEIKMDLIASHRSAKDFSKFWKATNSLNVRPSLPVCVDGQNS
QKDIANLFKNHFKVSSPLGPSVRGVDAEVCRDKELLCFSAKQVSEVINKMTRGKSPGHDG
LSIEHLKYGGIHLPRVLAMFYSLCVSHSYIPIEIMKTIVVPIVKNKTGNIADRSNYRPIS
LATIIAKVMDSLLDKILNSKLTFHDAQFGFKPGLSTESAIYSLKQTVQYYTSRKTPVYAC
FLDLSKAFDLVSYDLLWEKMERAGVEPEVLRVMQFWYAHQTNNVKWGKELSDSYRMQCGV
RQGGLTSPKLFNLYVNDLVVELSKTPVGCWIDGICVNNLSYADDMVLLGLCLQRETKCTC
I