| New model in OGS2.0 | DPOGS200525 |
|---|---|
| Genomic Position | scaffold3578:- 176-15995 |
| See gene structure | |
| CDS Length | 4695 |
| Paired RNAseq reads | 190 |
| Single RNAseq reads | 439 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009343 (2e-10) |
| Best Drosophila hit | CG42330, isoform H (2e-35) |
| Best Human hit | hemicentin-1 precursor (2e-84) |
| Best NR hit (blastp) | PREDICTED: hemicentin-1 [Xenopus (Silurana) tropicalis] (2e-135) |
| Best NR hit (blastx) | PREDICTED: hemicentin 1 [Bos taurus] (1e-104) |
| GeneOntology terms | GO:0005021 vascular endothelial growth factor receptor activity GO:0005509 calcium ion binding GO:0005515 protein binding GO:0005524 ATP binding GO:0005576 extracellular region GO:0005604 basement membrane GO:0005887 integral to plasma membrane GO:0005938 cell cortex GO:0006468 protein amino acid phosphorylation GO:0008218 bioluminescence GO:0018298 protein-chromophore linkage GO:0030054 cell junction |
| InterPro families | IPR007110 Immunoglobulin-like IPR013783 Immunoglobulin-like fold IPR013098 Immunoglobulin I-set IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 |
| Orthology group | MCL10155 |
Nucleotide sequence:
ATGGAATGTCAAATGATAATCTTAAGAGATCAATGTATACAGATCGTGTTCGTGTTGACT
GGCCACTGCAACGATCTCAACAAACCTTCGTACCAGGTTTACGAGCAAATAGCGACCGCT
AGCTCGGGGCAGGTGTTCAATTTAAATAAAACCAGCGTTCACAAGGTTTTAGAATTCGTT
CGTAGTTCTATCCGGGGACGTACAGTTAACCTTGGTTCATCAGTGAACCCCCCAGGATAC
AATTACACTCAACAGATTCCAGTCGATAAGACAGTGGGTGAAGTAACAGTGTCTGTGTCG
GGAGCCAAGCCCAGTATTAAAGTTGTGAAGCCAAGCGGCGAGGAACTCACAGGACCTCCA
CAACTCGTCACTATATTGGATCTGTCTGAGATAATGATAGTGAAGGTGTTATCTCCAGAG
CCTGGTCCGTGGCGTGTGACGGTGGGCAGCTCCGAGCCTCACTCGGTGAGGGTCAAAGGT
CTCTCTGAGCTCTCCTTCACTCATGGATTCTCTGTCACAGACGTAACAAGCCTCAATGAC
ACCAGCTACAGACCCTTGAAAGATATTCCCAGTGTGACGGTACCGAAGAAGATAGTGTCT
CACCCACACTCTCGTGTCGTACTACCATGTTCCGTGGACAGCGTCGTGCCGGTCACCGTT
GTTTGGACTCGACGCGGTGTCGACCTTCACGAACACACTCACAGTCTACGAAGCACTACA
GCTGAGTATGTAATAAAGGACGTGTCTGAAGCTGATGTGGGTACGTATCGCTGTCTCGCG
AGTAACGCCGCGGGGCGCGCCACTGCGGAGACGAGCGTCGATATGATAGCGTTGCCCCCA
CAAGTCACGGTGACTCCCACGAGCGTCACCGTGACAGAGACCGAGCGTGTGTTGTTGACG
TGTTCTATATACAGCGAGACTTATCTGCACCGAGCCAGGATCGAGTTCCAAGGGGATCTG
AAACATTACGATATCAAATTGGAGCCATCGATCGATGGTTTGTACACATTAAACAGAACC
ATTGAAGAGGCTAAGCAAAATGACAGCGGTATTTACACCTGCATAGCCGCAAACAGAGCA
TCAGATTCCGTCCAAGTGACCGTACATATCAAACCCGAAGTTAGCATAGTCGGTTCTAAG
AACGTGTCTCTGCCACAAAACAGCACTTACGATGTCGTATGTACAGTGGTCGCTCGACCA
CAGCCACGCGTGTTGTGGCACAAAGAGACCGAGGAGTTTTTATATCACGTTCTAACAAAT
CCTGAACTAAATTTATACAGAAGCGTATTGACTGTAAACGGTACGAATGGTACTTATTTC
TGTATCGGCGAGAATTCTGAAGGCATCCATCAAGATAGTGTGGATATTAATGTTTACTCT
CCAATGATTTTGGAACGACAACTTAACGATACAACCGTAGAACTATACTCACCGGTCAAA
TTCCATTGCCAAATAAGCGCATATCCCAAACCTAATATAAAATGGCGTCATAACGACACG
CACGTGACGCGGGACGATAATGTCGCCGTTGATAATGATGTCCTTATTATAAAGAGGGTC
GATTTTAATAACCTCGGAGTGTATTTATGTGAAGCTGATAATGGTTATGAGAAAATTACA
GTGAATTTCAGCTTAGGTTTACACGGACTGGCAAAACCGCTTATATATAAGGAACATGAG
AAGATTGTTGTTCGTGCAGGGGAAACACTGAATTTGACATGTAGAATATTATCTGGCAAC
CCGAAACCGGATGTAACGTGGCGATTTAAAAGTTCCACCAATTTCACCAGCTTAATAGAC
ACTTCATTAAAAAATTATACAGTTGTTATAGAAAATGTTAATAAAAATAACACAGGCGCG
TACAGATGTGAAGCGAGTAACGTCATAGGAGAAGACGTTCATGAACTGACAGTGAGTGTG
CAATATCCGCCGGAACTACACTCAGACCAGGAAGCCTACAAGATGGAAGGTCCACGGCAA
GTCAAGATGGGCGACGCGATAAGCCTGAACTGTAATGTCACCGGCGACCCGCTTCCGCTC
GTGACTTGGACCAAAAACGGCTTACCGATAAATTATTCAAAAAATACACATCTGCACGGA
GACACTTTGGTGATCGAGAGCGCCACCAAGTTCGACTCCGGCGTCTTTGTGTGTAACGCC
AGTAATGTCCTGGGATCTACGTCGCAGAATTTCACTATAATTGTATATGCGCCTCCCGTA
GTGACATCTAGCGGCGCTGAACTGGAAGTTTTGGAGGGTGAATTGGTTGAACTACCGTGC
GAGGTCAAAGGTCAACCGGAGCCGAGGGTGAAGTGGACTCATAACGGTCAGGATATCATA
GATAGGAGAAGACATAGAGACGGATATGGGCTGAGATTTATCGCTAACTTAACCGACTTC
GGCGACTACCGGTGTCTCGCGAGCAATGACTTCGGGAACTCTTCGTTGAACTACACACTG
TATATATGGGTGACGCCATCTATTGAGGAGAGTGAGGAAGAAGTTATTACTATAGAAAAG
GGTTGGAACGTTAGTGTTGAATGCAACGCTGTCGGGTTCCCGATACCGGTTATATCGTGG
AAATTCAATAATGTTGATTTGAAGGAAAACACGTCGAATGTAAGATTCAATAATGTCGGA
TCGTTGTCTGTAACGAACAGCAGTGTAGCCAGCCAGGGCGTGTACACGTGCTGTGCCGAA
AACATCGCCGGGGCAGCGTTTAAGAACTACATTATTAATGTGAATGAGGCTCCTTATTTC
CTGACCGACAACTTCACGGGTCCGTACATCGCGTCGACGCTGGACAAGACGCTGGCCTTG
TCCTGTAACGTCGCAGGCGACCCTCGACCTTTTGTGTACTGGAGTAAGGACGGTATTGGC
TTAAATGTGGATTCTCGTTTCGCCGTAGACACGGAAGGCACACTAATAATGAAAAACCCC
ACGGAAGACTTGAGCGGTGTCTACACGTGCACCGCCATTAATATCGCCGGGAACGCTAGC
AGAGACGTCGCCGTACAGATCTACTCTCCGCCGATATTAATGAGAGACGAAACTTCACCT
TTGATTACAACGGCGATGGAAGGAACGAGTGTTGAAGTGACATGTCCTGTACGAGGAAAC
GTCACTGTCAAATGGTATAAGAATGCAATCCTGATATCGAATGAAACCCTTAAATTTTCG
AACATATCTCGTACAAACGCTTCCTCACACACCTGCGTGGCCACCAATATGATGGGCTCT
ATACACACTGACGTCATCGTGGACGTACAATGGCCGCCGAAGATACAAGATGGCGGAGAT
GTTGAAATATTGGCGGGAAACGACTGTTTCATTGATTGTAAAACTGATGCAAACCCACGC
GCTGAGATAAAATGGTTATTCAACTCCAAGGCACTTATGGGTGAAAACAAAGAAAAGTTA
CCAATACTAGACGCGAAAGCTTACAACAGCGGCGTCTACCGGTGTGTTGCCAGCAACGTA
CACGGGACCGTGTTCAAAGACACTCGGTTACAAGTCATAGAACCGCCATTTATATCAATG
TTTGATTATTTGGAAGTTGAACTCAAATCAGGAACAAATGCTAGTCTTGATTGTAAAGCG
ACTGGGACGCCACCGCCCAAAGTCGCTTGGACTTATAACAATACGAATTGGGTGTTACAA
AACACGTCCTTAATATCTATCGATACAACAATTCTGTCTGAGGGGCTTTTCACTTGTAAG
GCGTCGAATAAAGCCGGTATAAGGTCTATAGTTTATCGTGTAGTAGTCATTGTAAGCCCC
GTCATTGAGGAGGTGATCAGTTTTGTTGGTGGAGAGGGAAGAGTTGTTGGAGAAATAGAA
GAAATTGAGGTTGGTACAAACAGAAGAATAGCATGCAAAGCATCTGGCAACCCTAGTCCC
ATAATACAATGGTTACACAATGGCAACATTGTGTCCAATGAAACGGGACTTTATGCGGAC
TTGATATTGACAAATGTTACCTCATTAAATAAAGGGGAATACGTTTGTGTTGCCAGTAAT
ATAGGTGGTGTTGATCAAAAGAGTATTAAAATAGACGTATTAGAACCCCCGAGAATATTT
CAAACTCTCTTCTACAACGCCAATTCGTCACAAGCCAACGTGACATTAGCGGTGCTTTGT
AACCAGGTGTATCACCTTCACTGTCACCCGTATGGGAACCCCCTACCGGATGTATACTGG
TTCAAAGATGGCGTTCCTTTGAAATTTTATGACGACGAAATGTTGTCAACCGACTTCGGT
GAAATAATCGTCTCTAAGGGCGCCAAATACGAACAAAGCGGAAATTATACCTGTGTTGCC
AGAAACAAAGTAGGCAATGCAAGCGTTAGTTTTTTTGTTGACGTTTTAGTTCCCCCTCCT
CCTCAGAAGGGAGAAATCAAACGAGTGAAAATCTTGTCAGGGTTGTCACTCAATATAAGT
TGTCCGGTCGAAGGACATCCTCTACCGTTTATAAGGTGGATTAAACAACCCTACACGGAA
ATTGTGGAGAGTACGAGGACACTGTTGCTAGATTATAATTCCACTTTAGTAAGTGCTTTT
AATGTTATATATACAGGAACGTTTGTTTGTGTATTAACATATATATATGTATGTGTAATG
TACATTTTAACATGGAAAACAATTCATTATAAATTCTTAGAATGCAAGACACTTGTATCT
TTACGTCCCACTTAA
Protein sequence:
MECQMIILRDQCIQIVFVLTGHCNDLNKPSYQVYEQIATASSGQVFNLNKTSVHKVLEFV
RSSIRGRTVNLGSSVNPPGYNYTQQIPVDKTVGEVTVSVSGAKPSIKVVKPSGEELTGPP
QLVTILDLSEIMIVKVLSPEPGPWRVTVGSSEPHSVRVKGLSELSFTHGFSVTDVTSLND
TSYRPLKDIPSVTVPKKIVSHPHSRVVLPCSVDSVVPVTVVWTRRGVDLHEHTHSLRSTT
AEYVIKDVSEADVGTYRCLASNAAGRATAETSVDMIALPPQVTVTPTSVTVTETERVLLT
CSIYSETYLHRARIEFQGDLKHYDIKLEPSIDGLYTLNRTIEEAKQNDSGIYTCIAANRA
SDSVQVTVHIKPEVSIVGSKNVSLPQNSTYDVVCTVVARPQPRVLWHKETEEFLYHVLTN
PELNLYRSVLTVNGTNGTYFCIGENSEGIHQDSVDINVYSPMILERQLNDTTVELYSPVK
FHCQISAYPKPNIKWRHNDTHVTRDDNVAVDNDVLIIKRVDFNNLGVYLCEADNGYEKIT
VNFSLGLHGLAKPLIYKEHEKIVVRAGETLNLTCRILSGNPKPDVTWRFKSSTNFTSLID
TSLKNYTVVIENVNKNNTGAYRCEASNVIGEDVHELTVSVQYPPELHSDQEAYKMEGPRQ
VKMGDAISLNCNVTGDPLPLVTWTKNGLPINYSKNTHLHGDTLVIESATKFDSGVFVCNA
SNVLGSTSQNFTIIVYAPPVVTSSGAELEVLEGELVELPCEVKGQPEPRVKWTHNGQDII
DRRRHRDGYGLRFIANLTDFGDYRCLASNDFGNSSLNYTLYIWVTPSIEESEEEVITIEK
GWNVSVECNAVGFPIPVISWKFNNVDLKENTSNVRFNNVGSLSVTNSSVASQGVYTCCAE
NIAGAAFKNYIINVNEAPYFLTDNFTGPYIASTLDKTLALSCNVAGDPRPFVYWSKDGIG
LNVDSRFAVDTEGTLIMKNPTEDLSGVYTCTAINIAGNASRDVAVQIYSPPILMRDETSP
LITTAMEGTSVEVTCPVRGNVTVKWYKNAILISNETLKFSNISRTNASSHTCVATNMMGS
IHTDVIVDVQWPPKIQDGGDVEILAGNDCFIDCKTDANPRAEIKWLFNSKALMGENKEKL
PILDAKAYNSGVYRCVASNVHGTVFKDTRLQVIEPPFISMFDYLEVELKSGTNASLDCKA
TGTPPPKVAWTYNNTNWVLQNTSLISIDTTILSEGLFTCKASNKAGIRSIVYRVVVIVSP
VIEEVISFVGGEGRVVGEIEEIEVGTNRRIACKASGNPSPIIQWLHNGNIVSNETGLYAD
LILTNVTSLNKGEYVCVASNIGGVDQKSIKIDVLEPPRIFQTLFYNANSSQANVTLAVLC
NQVYHLHCHPYGNPLPDVYWFKDGVPLKFYDDEMLSTDFGEIIVSKGAKYEQSGNYTCVA
RNKVGNASVSFFVDVLVPPPPQKGEIKRVKILSGLSLNISCPVEGHPLPFIRWIKQPYTE
IVESTRTLLLDYNSTLVSAFNVIYTGTFVCVLTYIYVCVMYILTWKTIHYKFLECKTLVS
LRPT