| New model in OGS2.0 | DPOGS210860 |
|---|---|
| Genomic Position | scaffold2518:+ 4852-6919 |
| See gene structure | |
| CDS Length | 1134 |
| Paired RNAseq reads | 500 |
| Single RNAseq reads | 1789 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006985 (2e-163) |
| Best Drosophila hit | Sex combs extra (4e-72) |
| Best Human hit | E3 ubiquitin-protein ligase RING2 (3e-86) |
| Best NR hit (blastp) | PREDICTED: similar to ring finger protein 2 isoform 1 [Apis mellifera] (3e-151) |
| Best NR hit (blastx) | PREDICTED: similar to ring finger protein 1 [Tribolium castaneum] (2e-133) |
| GeneOntology terms | GO:0000151 ubiquitin ligase complex GO:0005515 protein binding GO:0001739 sex chromatin GO:0046872 metal ion binding GO:0004842 ubiquitin-protein ligase activity GO:0000278 mitotic cell cycle GO:0016604 nuclear body GO:0071535 RING-like zinc finger domain binding GO:0009948 anterior/posterior axis specification GO:0008270 zinc ion binding GO:0005634 nucleus GO:0001702 gastrulation with mouth forming second GO:0003682 chromatin binding GO:0031519 PcG protein complex GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0071339 MLL1 complex GO:0016574 histone ubiquitination GO:0016564 transcription repressor activity |
| InterPro families | IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL13944 |
Nucleotide sequence:
ATGTCGTCTACAGAACCTTCACAGAACAAGACCTGGGAACTATCCCTATATGAATTGCAC
CGTACACCGCAGGAGGTGATAACAGATGCCACAGAAATAGCGGTATCACCGCGCAGCTTG
CACAGTGAATTAATGTGTCCTATTTGTTTGGATATGCTAAAGAAAACTATGACTACGAAA
GAATGCTTGCATCGGTTTTGTTCAGACTGTATTATTACTGCACTTCGATCTGGAAATAAG
GAATGCCCTACATGTAGAAAAAAACTGGTATCTAAAAGATCACTTAGGCCCGATCCAAAC
TTTGACTTACTTATATCCAAAATTTATCCTAGCAGAGACGAATATGAAGCTCACCAAGAG
CGGGTTTTGGCTAAAATCAATATGTCCCATTCCCAAGCTTCTTTAGTAAACTCTATAACC
GAAGGTATAAAGTTACAATCACAGAATAGGCCACAAAGAGCGCGCAAAAATCATGACGAC
AACAGTAACGCTTCGAATTCAAACAATAATACGGAGCCTCCACAAAATGGTAGCAGTAGC
TCGGTACCTAAGGACAGTACATCTTCAGCCGCAAACCCTACCACACCCGGACAATCAACT
TCGAACCCTGCATCTGTACGAAGTACTCCATCTCCTGTGCCATCGAACATTAGTTCTGTT
TCAAAAAACACCAGCACAACTAAGCGGGCTAAATCCATTTTGACATCCGAACGCAGTGAA
GGAAGTGAATCTAGTGACAGCAGGACTGAAGGCGAGAACTCAATGGACACAGAGGGTGAA
AGTGAACCCTTGAATCCTAATGAAATAGAGCTCGTGTTTAAACCACATCCCACAGAGATG
ACAGGAGACAATCAACTAATGAGAGCTCTCCGTGACAGTTCAGTGAGATATTTGAAAACT
ACAGCCAATGCTTCAGTGGATCATCTCAGCAAGTATCTCGCTATGCGTTTAACATTAGAT
CTGGATGCTGAACTACCAGAGACCTACCGCCTCTTGAACTTCTGTATCTATGTGGCTCCA
TCTCCTGGACAGTTTGTGCCACTGGCCGGCTCGCAGACGTTGAGACAAATTAATGATAAA
TTTTGGAAGGTGAACAAACCGCTGGAGATGTACTATTCTTGGAAGAAAACCTAG
Protein sequence:
MSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTK
ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQE
RVLAKINMSHSQASLVNSITEGIKLQSQNRPQRARKNHDDNSNASNSNNNTEPPQNGSSS
SVPKDSTSSAANPTTPGQSTSNPASVRSTPSPVPSNISSVSKNTSTTKRAKSILTSERSE
GSESSDSRTEGENSMDTEGESEPLNPNEIELVFKPHPTEMTGDNQLMRALRDSSVRYLKT
TANASVDHLSKYLAMRLTLDLDAELPETYRLLNFCIYVAPSPGQFVPLAGSQTLRQINDK
FWKVNKPLEMYYSWKKT