| New model in OGS2.0 | DPOGS212316 |
|---|---|
| Genomic Position | scaffold741:+ 43453-44584 |
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 273 |
| Single RNAseq reads | 664 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012074 (4e-139) |
| Best Drosophila hit | CG11200, isoform A (1e-52) |
| Best Human hit | retinol dehydrogenase 12 (3e-37) |
| Best NR hit (blastp) | short-chain dehydrogenase [Aedes aegypti] (2e-67) |
| Best NR hit (blastx) | short-chain dehydrogenase [Aedes aegypti] (2e-71) |
| GeneOntology terms | GO:0004090 carbonyl reductase (NADPH) activity GO:0055114 oxidation reduction GO:0005488 binding |
| InterPro families | IPR016040 NAD(P)-binding domain IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase |
| Orthology group | MCL12519 |
Nucleotide sequence:
ATGTATCTGGTAGCTATTTCGGCGGTGATAACTATGGCAGGGGTTACTTATTGGTATGTA
AACAGACGAAAACCTATCAGGCATATACTCAGTGAAATTAAATACGCTATAGACATGCAA
GGGGCAGGCGCGGGGGGCCTGATAGACGACTGGGTCAGTGTTTGGAGGAACAGGATAGTG
TTGCCAGATTGTAAAAACAAAATAGCTGTCATAACGGGAGGAGCTCGGGGCATCGGCACC
GAAGTTGTGAGAGGATTCTTAAAATCAAACATGACTGTCATAATGGGTGTTAGAAATCCA
GACTCGGTTAAGAAATTGATTGAAACTATGGATAACGGACACAACATACGAGCATTTCCA
TTGGATTTACAATCACTGAAATCAGTTAAACAGTTTGCAACCAGTGTGTTGAAAGAGTTC
AAGGCAATACACATATTGGTGAATAACGCTGGCATAATGTTTGGAGATTATAAATTAACA
GAGGATGGCTTCGAAACACAACTAGCGGTGAATCATTTGAGTCATTTTTATTTGACACAT
TTATTGTTACCAGCATTAAAAAACGGAGGCAAAGTCAATGAACCTGCACGAATTGTGAAT
GTAACATCATGTGGTCATTTTCCCGGAAAGATTTACTTTGAAGATATTAATATGAAAGAA
CATTATGATACTACGGCAGCTTATGCACAATCTAAATTGGCTCAGTTAATGATTGCAAGG
TATATAAACAGACTGTTGGAAGATAAAGACGTCCCTGTGAAGTGTTATTCAGTACACCCA
GGCATAGTGGATACAGATCTGTTTGAGAAGACAAACTTTGCAAAATTTCCATGGATTAAA
AGAGCTTTCTTCAAAACACCAGAAAAGGGTGCGGTTTCTATACACTATGCTTGTTTTAAT
GAGGAGATTTTATCAAAAGGTGGTCTATATATTGCAAATTGTAAGGAAGGTTTCAGCAAC
AGATTCTCTAAAAATGAGAGACATCAAGAGAAATTATTCAGGCTATCTTGTGAAATGGTT
GGAATTGATGCCGAGAAGTTTGGAAGAGATTAG
Protein sequence:
MYLVAISAVITMAGVTYWYVNRRKPIRHILSEIKYAIDMQGAGAGGLIDDWVSVWRNRIV
LPDCKNKIAVITGGARGIGTEVVRGFLKSNMTVIMGVRNPDSVKKLIETMDNGHNIRAFP
LDLQSLKSVKQFATSVLKEFKAIHILVNNAGIMFGDYKLTEDGFETQLAVNHLSHFYLTH
LLLPALKNGGKVNEPARIVNVTSCGHFPGKIYFEDINMKEHYDTTAAYAQSKLAQLMIAR
YINRLLEDKDVPVKCYSVHPGIVDTDLFEKTNFAKFPWIKRAFFKTPEKGAVSIHYACFN
EEILSKGGLYIANCKEGFSNRFSKNERHQEKLFRLSCEMVGIDAEKFGRD