| New model in OGS2.0 | DPOGS210129 |
|---|---|
| Genomic Position | scaffold3424:+ 7406-12784 |
| See gene structure | |
| CDS Length | 1242 |
| Paired RNAseq reads | 320 |
| Single RNAseq reads | 886 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000236 (0.0) |
| Best Drosophila hit | CG6638 (3e-150) |
| Best Human hit | isovaleryl-CoA dehydrogenase, mitochondrial isoform 1 precursor (5e-141) |
| Best NR hit (blastp) | isovaleryl coenzyme A dehydrogenase [Heliothis virescens] (0.0) |
| Best NR hit (blastx) | isovaleryl coenzyme A dehydrogenase [Heliothis virescens] (0.0) |
| GeneOntology terms | GO:0008470 isovaleryl-CoA dehydrogenase activity GO:0006552 leucine catabolic process GO:0005759 mitochondrial matrix GO:0050660 FAD binding GO:0055114 oxidation reduction |
| InterPro families | IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR006089 Acyl-CoA dehydrogenase, conserved site IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR006092 Acyl-CoA dehydrogenase, N-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase |
| Orthology group | MCL14928 |
Nucleotide sequence:
ATGGCTCTCAGATTAACGAAAGTCCGACAATTATTTAAACAATGCACAAACACATCAATT
TTAAGAAATGCATCTCACTATCCGATAGACGAGAATATATTTGGTCTCTCCAGTGAACAA
AAACAGCTACGTCAAATGGTTTTTGATTTCGCACAAAAAGAATTAGCACCGAAGGCGGGA
GAGATAGATAGAGAAAATAATTTCAAAGAACTAAGAGAATTCTGGAAGAAGCTTGGTAAT
CTTGGGCTATTAGGTATTACAGCCAGTCCAGAATATGGGGGCACGGGGGGGAAATACACA
GACCACTGCGTTATTATGGAAGAGCTGTCAAGAGTAATTAGCTTCGCGAGAATGTATTTC
TACGCGACTCTTAACTTTCTGAAACTGTCTACTTGGTCTGTACTTTGCAACCCTCTAATA
AATATGTTAAACGTACTAAGAGAACATATAGGCGCTCTGGCGATGTCTGAGCCCGGATCA
GGTAGTGACGTAGTCTCTATGAAACTACGAGCTGAAAAGAAAGGGGACTATTACGTACTC
AATGGCAATAAATTCTGGATCACTAATGGACCTGACGCGGATGTTTTGGTGGTGTACGCA
AAAACTAGCCTTACAAACAAACCTCAGCATGGAATATCTGCGTTTTTAGTAGAAAAGGGA
TTTCCGGGATTTTCCACGGCACAGAAATTAGATAAACTGGGAATGAGGGGTTCGAACACC
GGCGAACTCGTCTTCGAAGACTGCAAAGTACCAGCGTCAAATCTCCTCGGTGAAGAGAAT
AAGGGCGTATATGTACTCATGTCAGGTCTGGATTTAGAGCGGCTAGTACTAGCCGCAGGA
CCTGTCGGTTTGATGCAGGCAGCGGTTGACGTAGCCTTCGACTATGCTCACACTAGAAAA
CAATTCGGAAAACCTATTGGTGAATTCCAATTATTACAGGGTAAAATGGCGGATATGTAC
ACAACGCTAAGTGCGTGTAGAAGTTATTTGTACAATGTAGCAAAGTCCTGTGATGAAGGA
CATGTTAACAGCAAAGATTGCGCAGGAGTTATTTTGTACTGCGCGGAAAAAGCCACGAAA
ATCGCTCTTGACGCTATTCAGATATTAGGTGGCAATGGATATATCAACGATTATCCCACG
GGCAGAATTATGAGAGATGCTAAACTTTATGAAATAGGAGCTGGTACTTCAGAAGTCAGA
AGAATGTTGATAGGCAGGGCACTGAACAGTGAATATAAATAA
Protein sequence:
MALRLTKVRQLFKQCTNTSILRNASHYPIDENIFGLSSEQKQLRQMVFDFAQKELAPKAG
EIDRENNFKELREFWKKLGNLGLLGITASPEYGGTGGKYTDHCVIMEELSRVISFARMYF
YATLNFLKLSTWSVLCNPLINMLNVLREHIGALAMSEPGSGSDVVSMKLRAEKKGDYYVL
NGNKFWITNGPDADVLVVYAKTSLTNKPQHGISAFLVEKGFPGFSTAQKLDKLGMRGSNT
GELVFEDCKVPASNLLGEENKGVYVLMSGLDLERLVLAAGPVGLMQAAVDVAFDYAHTRK
QFGKPIGEFQLLQGKMADMYTTLSACRSYLYNVAKSCDEGHVNSKDCAGVILYCAEKATK
IALDAIQILGGNGYINDYPTGRIMRDAKLYEIGAGTSEVRRMLIGRALNSEYK