| New model in OGS2.0 | DPOGS209173 |
|---|---|
| Genomic Position | scaffold596:- 26912-36248 |
| See gene structure | |
| CDS Length | 2757 |
| Paired RNAseq reads | 1162 |
| Single RNAseq reads | 2823 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011528 (0.0) |
| Best Drosophila hit | clumsy, isoform B (4e-179) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 3 precursor (2e-144) |
| Best NR hit (blastp) | AGAP000803-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | glutamate receptor, ionotropic kainate 1, 2, 3 (glur5, glur6, glur7) [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0015277 kainate selective glutamate receptor activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity GO:0005234 extracellular-glutamate-gated ion channel activity GO:0030288 outer membrane-bounded periplasmic space GO:0006811 ion transport |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR001828 Extracellular ligand-binding receptor IPR001638 Extracellular solute-binding protein, family 3 IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001508 NMDA receptor |
| Orthology group | MCL10030 |
Nucleotide sequence:
ATGCCCGTAAATAAAGCTGAAGGAAGCTTAACGTGGGGGCTAAAATTGTCACTTCTAATT
ATTGTGCTATGTGGCGGTGTGCAATGTGCTTTTCGGAATTTTCAAGCATTGAAAACGAAT
ATATATATCGGTGTTATACTACCCAACAACTCTGTGACCGAAGTAGCTTTTGCCTCGGCA
CTAGCGAGAGCCTCGATGGAAAGCGAACAATATCGTTATTCAATGAAAATAGTCTACGTG
CCCTACGGCGACAGCTTCGCAGCTTCAAAAGCCGCTTGTGAGCTTTTATCAGCTGGTGTG
ATTGCGATCTTCGGACCCACTGACACCACTTCAGCTGCGGCTGTCGAAGCACGCTGCAGG
TCTGCAGGTGTTCCGCACATTCAAGCATTATGGCGCCCACCTCACGTCCGAGGTTTGGAA
CGTCTCTCGCCCCCTAGCATTAATTTACACCCAGAATCCGTAGCGCTCTCAAAGGCAGTC
GCCATCTTTATAAAAGACAGCGATTGGAACACTTATACGCTTCTTTATGACGATGATCAA
GGACTGATTCGGTTGCAAGAAATATTAAAGAATGCCCAACCAGGACACAAATGGTTAGCA
CGCCGTCTGCGTCCAGGGGAAGATAATAGACCCTTGCTCAAATTATTAAAAGCCTACGGT
GAAACAAGAGTTATAATAGATTGTCCCGCTAACAGAGTGCTCGAATATTTGCGACAGGCG
CATGAAGTTAAATTCTTTGAGGACTACATGAGTTACATCCTAATGTCACTCGATGCTCAT
ACGTTAGATCTACAAGAGCTGAGGTATGGTCTATCAAATGTCACATGCTTGAGAATCTTT
GACCATTCAGACGGTCGAACTAAGTCCTATCTGGCTGATTGGAAGGCGAGAACTTCAAAT
GACATCAAAATGCCAAAGAAAACGCACGAGATTACTATCGAAGCAGCCCTTGCTGGTGAC
GCAGCAAGACTGATAACAGATTCTGTGGAAAATGCACCAAAACAGTTTAAAATAGCAGCA
CAGTCGATTGAATGTAACACAAAATCTAAATGGGAAGATGGAGAGACATTCACAAATCAC
CTTTTGACGAATCCAATACAAGGCATAACGGGACGTGTGCAAGTAGATAATATAACTGGG
GAGAGAACAAACTTCAACGTAGAAGTTATGGAGCTATCTAACAGCGGATTTAACAGCATA
GCAAAATGGAACGCGAAAACGGGCTTCGACTATGCACGGACGGCAACCGAGGTTTCCGAT
CTATTAGCAGAAAAATGGCAGAACAAAACATTCAAAGTGGTTTCTAGGATCGGTGCTCCT
TATCTCGTCGAGAAAACACCAGCTGAAGGCGAAGTGTTGGTCGGGAACGATCGATACGAG
GGTTATTCGAAGGATCTCATACACGAAATCTTAAAAGAAACGCTTCACTTAAATTACGTA
ATAGAAATAGTTCCTGGCAACGAGTACGGAAAGTATAATAAGGACACCAAGAAATGGAAC
GGCCTTATTGGACATCTCCTCGAAAGGAAAGCTGATTTAGCTATTTGTGATCTGACTATA
ACGTACGAAAGAAGAGCCTTTGTGGATTTTACGACGCCTTTTATGAGTTTAGGGATCAGT
ATTCTATATTCAAAGGCAACTCCGCCAGAGCCGGAACTTTTCTCATTTCTAAAGCCATTC
TCCGTGGATGTCTGGATTTATATGGCCGCTGCATATTTGATGGTTTCATTATTGCTACAT
ATTTTAGCAAGATTCGCTCCAAACGACTGGGAGAACCCGCATCCCTGTGACAAATCCCCT
AAGGAATTGGAAAATATTTGGCATATCAAGAACTCTTGCTGGCTTACCGTCGGATCGATT
ATGACCCAAGGATCTGATATATTGCCCAAAGGATACTCCACAAGATGGGTGTGTGGCATG
TGGTGGTTCTTTGCCCTCATCATGTGTTCCTCCTATACCGCCAATCTCGCGGCTTTCCTC
ACAAACGCTGCCATGGACGACTCCATTAAAAATGTTGAAGATCTTGCTTTGCAAACTAAA
ATCAAATACGGAACTGTAGATGGAGGTTCTACTTATTCATTTTTTAAGAGATCCAACGTG
TCCACATATCAGAGGATGTGGACTGCAATGGAAGCAGCAAGACCATCAGTCTTTGTAAAA
AATAATGATGAAGGTGTAGAAAGGGTTGTTAAATCAAAACGAGGATACGCTTTCCTAATG
GAGTCAACCGCTATCGAATATCAACTTGAACGAAACTGCAATTTAATGCAAGTTGGCAAC
GAACTCGATTCTAAGGGATATGGTATTGCCATGCCTTTTTTGTCGTCTTACAGAACAGCG
GTTGATAATGCCCTTCTAAAATTAGCTGAAGGTGGTAAATTGTTGGAACTTAAAAATCGT
TGGTGGAAGCCAGCAGAGAAACGGTGTACGTCAGAAGAGGTTGGAGATAAGGGAGGTAGT
GCCGTGGAGCTTGGTGTAGACAACGTGGGTGGAGTCTTTGTTGTTCTGGCTGTTGGTTGC
GGCCTAGCAGCTTGTATGGGAGGATTCGAATTCCTCTGGCACGTTAGAGATGTTGCTATT
ACTCAATCGGAAGTTTTTTGGGCGGAATTGAAATTCGCTTTGAGCTTTTGGGAAACTGAG
AAGCCTGTCAACATTTCTCGATCATCGTCAGCTAAATCAGAAAACATTGCTTCTAGAGCA
TCGTCGGTGTTACGCTCTGTACTGGATTTAGCCCATCTTGATGTTTTTAATAAATGA
Protein sequence:
MPVNKAEGSLTWGLKLSLLIIVLCGGVQCAFRNFQALKTNIYIGVILPNNSVTEVAFASA
LARASMESEQYRYSMKIVYVPYGDSFAASKAACELLSAGVIAIFGPTDTTSAAAVEARCR
SAGVPHIQALWRPPHVRGLERLSPPSINLHPESVALSKAVAIFIKDSDWNTYTLLYDDDQ
GLIRLQEILKNAQPGHKWLARRLRPGEDNRPLLKLLKAYGETRVIIDCPANRVLEYLRQA
HEVKFFEDYMSYILMSLDAHTLDLQELRYGLSNVTCLRIFDHSDGRTKSYLADWKARTSN
DIKMPKKTHEITIEAALAGDAARLITDSVENAPKQFKIAAQSIECNTKSKWEDGETFTNH
LLTNPIQGITGRVQVDNITGERTNFNVEVMELSNSGFNSIAKWNAKTGFDYARTATEVSD
LLAEKWQNKTFKVVSRIGAPYLVEKTPAEGEVLVGNDRYEGYSKDLIHEILKETLHLNYV
IEIVPGNEYGKYNKDTKKWNGLIGHLLERKADLAICDLTITYERRAFVDFTTPFMSLGIS
ILYSKATPPEPELFSFLKPFSVDVWIYMAAAYLMVSLLLHILARFAPNDWENPHPCDKSP
KELENIWHIKNSCWLTVGSIMTQGSDILPKGYSTRWVCGMWWFFALIMCSSYTANLAAFL
TNAAMDDSIKNVEDLALQTKIKYGTVDGGSTYSFFKRSNVSTYQRMWTAMEAARPSVFVK
NNDEGVERVVKSKRGYAFLMESTAIEYQLERNCNLMQVGNELDSKGYGIAMPFLSSYRTA
VDNALLKLAEGGKLLELKNRWWKPAEKRCTSEEVGDKGGSAVELGVDNVGGVFVVLAVGC
GLAACMGGFEFLWHVRDVAITQSEVFWAELKFALSFWETEKPVNISRSSSAKSENIASRA
SSVLRSVLDLAHLDVFNK