| New model in OGS2.0 | DPOGS209172 |
|---|---|
| Genomic Position | scaffold596:+ 19444-26156 |
| See gene structure | |
| CDS Length | 2613 |
| Paired RNAseq reads | 265 |
| Single RNAseq reads | 728 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011484 (0.0) |
| Best Drosophila hit | clumsy, isoform B (6e-117) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 1 precursor (2e-97) |
| Best NR hit (blastp) | Anopheles gambiae str. PEST AGAP012447-PA [Anopheles gambiae str. PEST] (5e-154) |
| Best NR hit (blastx) | Anopheles gambiae str. PEST AGAP012447-PA [Anopheles gambiae str. PEST] (2e-142) |
| GeneOntology terms | GO:0015277 kainate selective glutamate receptor activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity GO:0005234 extracellular-glutamate-gated ion channel activity GO:0030288 outer membrane-bounded periplasmic space GO:0006811 ion transport |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 IPR001828 Extracellular ligand-binding receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001508 NMDA receptor |
| Orthology group | MCL23570 |
Nucleotide sequence:
ATGTTACATTTGGTCGCAATTATAGTAAATTCACAGACTGGCTACGCTGAAGTTAGTACA
CGTCTACCTATCGGAGGGCTATTTAATTCGAAGACATTACCGAATTCCGCTTTGGCCTTC
GAAAATATACTCAAGATCGGTACAACTAACGCCTATCATGGGAAATTAATTGCAGCACAA
GTCACTGATAGCTATTCTACGGCATTAGAGATGTGCGCGAACACTTCGTCTGACGATGGA
ATAGTGGCACTAGTTGATGCCAGACCAACGAACGGAATTTGTGATGTCACGTGTTCGATA
TGCAACAAACTTAACATATCACATTTAATCCTGGGATGGCAGCCGCCAGCGACACTCGAA
AATGATATGTACTCATTTTTCTATCACCCGTCACCGGAAATAATATCAAGAGCCTTTGCA
ACTCTCATAAAGACTCTAAATTGGGACAAGTTCACCATTCTTTACGAAGACGAAGGCAGT
TTTATCCGCCTTCAAGAAATTATAAATACGTGGCCGTATAAAAATGATCAAATATTATTT
AAAAGGTTGGATCCGAATGGGGACAACAGAGAAACTTTTAAGTATATATTTAAAAGTTTT
ATATTAACAGCACTTGATGCCTATACAATAAATCTTGAAGATCTCGCCGACTTCAGGGCC
AATGTATCAACATTGCACCTAACTATGCCCAACGACATACGATGGATAGACAAAGATATG
AGCAATTATAATATTCGGTTGGAGACGGCCTTGACTGCGGATGCGTTGGGTCATCTAGAC
AAAGCTATAAGAAGTATGCTGATGGAGATCGAGGATCAAGAAGAATATTCTAGAAGACTA
ATACCGATAGCAGATCCGCCATCATTATGTTTTATGAAGAGTAAGGAGTATGAAGAAGCA
GCCTGGCCTCAAGGGGCAGCATTGCGGGACGCTTTATTAAAGACCACTTATAAAGGTTTC
ACTGGTAATGTAAACTTCGACAAATATGGAAAAAGAACAAATTTCGTCCTCCATTACTCC
AAACTAAGTAACGAGAGTCAGTTTATTTACGTCGGCAAATGGGACTATAAGACTGACACA
CTGTACACTGAAAAAGACATCACGGAAAGATCTTCAGCAAAAAGTTCCAAGTCAGTTATA
CGGATTGTGTCAAGAAAAGGCAAACCTTATTTCGATTTCTCCAACGAAACCACAACATTC
CGAGGATATGCTGTGGATCTGATAGACAAGATATTTGAGCACATGAGAAACAATGGGAAG
GATCTGAAATATGAGTTTTATAGAGTTAGCGGTGATGACTATGGCCATCCCATTGCGGGC
ACGAAAAAATGGAGTGGACTTATAGGAGAGGTCCTGGATCATAATGCCGATCTTGCAATA
TGTGATCTTGCTATCACATCAGAAAGGAACGCCCTAGTAGATTTCTCGACACCCTTTATG
TCTTTGGGGATCGGTTTGTTGACCAAAGAACCGGAGCCTGAAGAACCTGACATGTTCTCT
TTCATAAAACCTTTGTCTTTGGATGTGTGGCTGTATTTAGCTACGATATATATTATTGTA
TCTTTTGTCCTTCTAATATGTGCTCGTATGAGTCAAGATGATTGGGTGAATCCCCACCCC
TGCAATCAGAATCCGGAGAACTTACAAAACATATGGAGCTTGTACAATTGCATGTGGCTC
ACCATGGGTTCCATCATGACCCAGGGCTGCGATATATTACCCAGGGCGGTGGGATCTCGC
TGGGTCGCTGGTATGTGGTGGTTCTTCGCTCTTATCGTCACAGCATCTTATACAGCCAAC
ATGTCCACCTTTCTCAGTGCAAGTCGTCGCAGTAATGATTTACAGGAAGTTTCGGACCTC
GTTGATCAAAATTCCATTTCCTATGGTACTGTCGACAATGCATCTACTTACAGATTTTTT
GAAACATCTAACGATACTTTATACAAGAAGCTGTGGAATGTGATGAAGTCAGCAAGACCT
ACCGTCTTCACCACCTCCAACGAGGAAGGTCGCGATCGTGTCTTACGTAGTGAAGGAAAA
TACGCGTTTTTCATGGAGTCCACGTCTATTGAATATTACATGCAGAGATTCTGTAGTCTT
AAAATGACTGGAGGGAAACTAGATTCGAAGGATTATGGGATAGCAATGCCGAAAAATTCA
CCATACAAAAGAGGAATTGACAATGCGATACTAGCGCTCCAAGAATCAGGAGAATTGTTG
AAGTTAAAAACGAAATGGTGGGAAAAAGAGGACAATGCTCTGGATTGTAAGAAAACTGAA
ACCGAGGAAAACAGCGGCTCTGTGCAAATGAAAAATACAAGCGGGATCTTTATTGTCCTT
GCTTCTGGGGGCCTTATAGGATTCTTAGTAGCAATTATAGACTTCCTGTTGCATGCTAAG
AAGATTTGTGTCACTGAAAAGGTGTCGTTTAAAGAAGCGGTTGTGAGCGAGTGGAATGCA
TCCTTGGATCCTCGTGCCTTACACCGCCTGGCTGCGCCGCCACGTTCTGCAGCCCCTTCT
ACAGCATCACCGTCTCGGGAGCGTTCACAGTCTCGGGCAGTCTCAGTACTCCGAGCAGCC
ACAAGTTTCATCAACTTCGATGAAATATATTGA
Protein sequence:
MLHLVAIIVNSQTGYAEVSTRLPIGGLFNSKTLPNSALAFENILKIGTTNAYHGKLIAAQ
VTDSYSTALEMCANTSSDDGIVALVDARPTNGICDVTCSICNKLNISHLILGWQPPATLE
NDMYSFFYHPSPEIISRAFATLIKTLNWDKFTILYEDEGSFIRLQEIINTWPYKNDQILF
KRLDPNGDNRETFKYIFKSFILTALDAYTINLEDLADFRANVSTLHLTMPNDIRWIDKDM
SNYNIRLETALTADALGHLDKAIRSMLMEIEDQEEYSRRLIPIADPPSLCFMKSKEYEEA
AWPQGAALRDALLKTTYKGFTGNVNFDKYGKRTNFVLHYSKLSNESQFIYVGKWDYKTDT
LYTEKDITERSSAKSSKSVIRIVSRKGKPYFDFSNETTTFRGYAVDLIDKIFEHMRNNGK
DLKYEFYRVSGDDYGHPIAGTKKWSGLIGEVLDHNADLAICDLAITSERNALVDFSTPFM
SLGIGLLTKEPEPEEPDMFSFIKPLSLDVWLYLATIYIIVSFVLLICARMSQDDWVNPHP
CNQNPENLQNIWSLYNCMWLTMGSIMTQGCDILPRAVGSRWVAGMWWFFALIVTASYTAN
MSTFLSASRRSNDLQEVSDLVDQNSISYGTVDNASTYRFFETSNDTLYKKLWNVMKSARP
TVFTTSNEEGRDRVLRSEGKYAFFMESTSIEYYMQRFCSLKMTGGKLDSKDYGIAMPKNS
PYKRGIDNAILALQESGELLKLKTKWWEKEDNALDCKKTETEENSGSVQMKNTSGIFIVL
ASGGLIGFLVAIIDFLLHAKKICVTEKVSFKEAVVSEWNASLDPRALHRLAAPPRSAAPS
TASPSRERSQSRAVSVLRAATSFINFDEIY