| New model in OGS2.0 | DPOGS209446 |
|---|---|
| Genomic Position | scaffold24:- 125778-129468 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 23 |
| Single RNAseq reads | 90 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005863 (5e-149) |
| Best Drosophila hit | ionotropic receptor 75d, isoform A (3e-80) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 2 precursor (5e-07) |
| Best NR hit (blastp) | GE22541 [Drosophila yakuba] (1e-95) |
| Best NR hit (blastx) | GE22541 [Drosophila yakuba] (8e-90) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
| InterPro families | IPR001320 Ionotropic glutamate receptor |
| Orthology group | MCL10488 |
Nucleotide sequence:
ATGGCAGGTTTGCGACTGCGCGTGTTTCCAAGCACTCATCTGACGGCTGACCTGCCAGCG
TACCGTGACTACAGGGAGGGAGTACTTCTCGATGTGGGTTGCCTCAACGCCACACACGTT
CTACATAAATCATCAAGAAACCGTGCGTTCAATCTTCGTTACTCTTGGCTTCTGATCGAC
GACTCCCCCTTCAATATTACTTATGTTGAAGAAACACTATCCGACGTGTTGGTCCTCCCT
GACGGTGACGTCACTTGGGTCTCCGTGGATCGTATGGTAGATGTGTACAAGGTTAAAGCT
GACCAGCCGCTGGTCGTCACGCATTTGGGTATGAGAAGGAGTCGACGAGAACTCGAAGGG
TTATGGAGAAGTTTACGAACAACAGTTACAAGAAGGAAAAATCTACACAGTGTGTATCTG
AAGTCGGCGACTATAGTAACACAACCTCAATACTTCAAAGGATGGTCAGATCTGTCGAAT
CGGCAAATAGACACGTTCCCAAAACTTACTTATCCAATACTGAAGCTTTGCGGAGAAGAT
CTTAACTTTAGGTTCAATCTGAAACAAGTCGACCTTTACGGGGAGGAACGGAACGGCAGC
TTCGACGGTCTGGTGGGTCAGATGCAGCACGAGGGGTTGGAGGTCGGAGTCACATCCATG
TTCATGCGCAAGGACCGGTGGCGGGTTCTACATTTCTGCGCCGAAACCGTAGAGTTACAA
GGCGCGTTCCTGTTTCGCCAGCCTTCTCGCTCGTCTGTGTCCAACGTGTTCGCGTTACCC
TTCAGCCGGGGCGTATGGGCAGCTTCGGCAGCTGTGTTTGCGGGGGCGGCTACCCTGCTG
GCGGTGTTCGGTCTGGTGGCACGACGGACGGCCCTCGACCCCGTCGCACAGAGACTGACG
GTTCTCGAGAGTTTGACTTACGCTGTCGGCACCATTTGCCAACAAGGTTCATATCTGTGT
CCTAACCTGTGGTCCATGCGTCTCCTCATGTTTTGTACGTTGCTCGCCTCTCTGTTCGCC
TTCACGTCATACTCTGCCAAGATCGTCGCTATCCTCCAAGCCCCCAGTGATGCCTTGCGG
ACTATCGATGACCTCGCACGTTCTCCTATGGACCTCGGCGTGCAAGAGACTACTTATAAG
AGAGTCTATTTTGCTGAAAGCAAAGACCCAGCAACTCAAGCCCTGTATCGTCGTAAGCTG
CTGCCTCTCGGCGAGCGCGCATATCTCAGCGTTGTTGACGGCATCGCGCGCGTGCGAACC
GGACTATTTGCATTCCAGGTAGAACAGAGTTCGGCTTACGATATCATCAGCAAGACGTAC
ACGGAACGAGAAAAATGTGACTTGAAGGAGATCAAAGCCTTCACTCTGCCCATGGTGGCC
GTCCCCGTGAGGAAACACTCCGGGTACAAAGACTTGCTGGGAGCGAGACTCCGTTGGCAG
CGTGAGGTGGGTCTAATGGATCGTTACCGGCGCGTGTGGATGAGTGTGAGGACTCCGTGT
GACGCGGCTCAGGGCGGGTTCGTAAGCGTGGGTCTGGTGGACGTGCTGCCCGCCCTGCAC
GCGCTGCTGGCCGGCGTGCTGCTGGCCACAGCCCTGCTCCTCGTGGAAAAAGCTCACCAC
ACTGTTCTGACTCGCGCTTAA
Protein sequence:
MAGLRLRVFPSTHLTADLPAYRDYREGVLLDVGCLNATHVLHKSSRNRAFNLRYSWLLID
DSPFNITYVEETLSDVLVLPDGDVTWVSVDRMVDVYKVKADQPLVVTHLGMRRSRRELEG
LWRSLRTTVTRRKNLHSVYLKSATIVTQPQYFKGWSDLSNRQIDTFPKLTYPILKLCGED
LNFRFNLKQVDLYGEERNGSFDGLVGQMQHEGLEVGVTSMFMRKDRWRVLHFCAETVELQ
GAFLFRQPSRSSVSNVFALPFSRGVWAASAAVFAGAATLLAVFGLVARRTALDPVAQRLT
VLESLTYAVGTICQQGSYLCPNLWSMRLLMFCTLLASLFAFTSYSAKIVAILQAPSDALR
TIDDLARSPMDLGVQETTYKRVYFAESKDPATQALYRRKLLPLGERAYLSVVDGIARVRT
GLFAFQVEQSSAYDIISKTYTEREKCDLKEIKAFTLPMVAVPVRKHSGYKDLLGARLRWQ
REVGLMDRYRRVWMSVRTPCDAAQGGFVSVGLVDVLPALHALLAGVLLATALLLVEKAHH
TVLTRA