| New model in OGS2.0 | DPOGS209449 |
|---|---|
| Genomic Position | scaffold24:- 86055-90263 |
| See gene structure | |
| CDS Length | 2022 |
| Paired RNAseq reads | 56 |
| Single RNAseq reads | 184 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005866 (0.0) |
| Best Drosophila hit | CG40583 (2e-57) |
| Best Human hit | PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein on Y chromosome (3e-44) |
| Best NR hit (blastp) | PREDICTED: similar to CG40583 CG40583-PA [Tribolium castaneum] (9e-168) |
| Best NR hit (blastx) | PREDICTED: similar to CG40583 CG40583-PA [Tribolium castaneum] (2e-155) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR019782 WD40 repeat 2 IPR018249 EF-HAND 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR019781 WD40 repeat, subgroup IPR021717 Nucleoporin Nup120/160 IPR011047 Quinonprotein alcohol dehydrogenase-like IPR001680 WD40 repeat |
| Orthology group | MCL15748 |
Nucleotide sequence:
ATGGCAAACGATTGCGAAGTTAAGTCTATTATGTCTATATCATCTAAATCGGAAGGAAGC
ACGGCTCCGCTATCTCGCATTCGGTGGCGAAATGCTCCTCTTCACGAGAGATGCAGCATG
GCTGACATGGTCAAGATTAAAGAAGCGTTCCAGGCAGCTTATAGAAATAAAATGCTACCA
ACAGAATTTAGAAATCTCTTGAGGACATTGTTGAATGTTGAATATGATGATGACGAATTT
AATATACTTTTTATGAAGATAAATACGGCTCGCAACGGAGAGATCGATTGGGACGAGCTC
GTGTCGCATCTACTTCTGGGCTATTTCGGCAATGACCCTGAGAACCAGAGAGCCTCCCTC
CAGCTGCCGATTATGGGACTGCCGACTGTTATGAGATCACAGCATCGGCACCCGATATCG
AGAATATGTTTCTGTCCTGACGACCGGAGCACGGATCCCATGCAGGGCAACTACATAACG
GCGAGTCGCGATGGAATGATTAACTGGTGGTCCCTGGACATGTCGCTGTTGAGGACCGCC
TTCTCTTCCAGTCCTCACCTGAAAGTGCGCACGACCTGGGTGACGGACATGGTCTGTATG
CCGGACGTCAACATTATTGTGACGAGTTCTACCGAACGAGACCTGCGCTTCTATGACTGT
ACGGCGAAGACTTTCACCCTTAAGATCGTCATCACGAGCTGGGAGTACATGATCTGCTCC
ATGTACTACCACTTCTACAAGGACCCGAACGAGCGATGTATCCTGATCCTGGGCGACGTC
GGTGGTCACGTGCGCGTGCTCACCTTCTCTCCCATAAAGCGCGGTCCCTTCCGCAACCAG
CCCGGCCGGGCGCTGCAGCAACTGCGCCACGTCGACCTCCAGCGACGGCCCCACTTGTTG
CCGGAGCTGAGGTTGACGGAGAAGGGTCGCGTCCACGGCGAGTGGGTCCGTCAGGTGTCG
TTCTATTCGTCCCTGCACTGCATCGTGTCGTGTGCGACTTGCCCGGACTCTCTGCTCATG
TGCGACCTCGCCGGTTCCAAGACCTATAACATGTTTCACGTCGAGAAGGGTATTCAGTGT
TTCACATTCGACGAGGAGGCCCACATCCTGGCGACGGGAGGCCCGGACTGCACGGTCCGC
GTGTGGAGTCCGTTCGTGCCGCGCGCCGCGAGCGTGTCGCTGACGGGGCACCACGCCGCC
GTCACCGCGCTCGTGCTACAGATCTCCGCCACGACCTTGCTGTACTCGCTCTCCAGAGAC
CGCGTCATCAAGGTTTGGGACGTGCAGGGACAGGTGTGCCTTCAGACATATATAGACATC
CCTCCGCAAGTTGGCGAGCGCACACCCATCTCCGCTCTATATAACCCGGTGACTCGCGAG
TTCATAGTGGGAGCTATAAAGATCGCCGTGGTGGTCCTGGACGAACAGCTGAACCCCCTC
CACACGGACGGGTTCACGCACTCGCGGGCCGTGTCCAAGATCCTCTACAATCCGCTGTTC
AAGGTGGTCATCACGTGCGGCCTGGACAGCATCATCATCAACTGGGATCCGGTGACCGGT
AAGCGCAACGCCATGGTCCGCGACGCCCACACCCGCCTGCTGCACGGCGAGTCCATCCCA
GTGGAGATCACGGCCGCCTGCTTCGACCCCGGCTACCAGCTGCTGCTCACCGGCGCCAGG
AACGGGACACTCAAGGTGTGGAACTTCAACACGGGGATATGCTTGAGGAGTATGGCCATA
GAACACATGTGCGAAGTCACGAGCTGTTTTTGGGTCGAGGGGAGGATTCTAGCGGTGGGA
TGGAACCGACACGTCATAGAGTTCGAGGACGCGGGGGGGTCGGGAGGGTCCGGGGGGTCG
GGAGCGGTGGAGGGGGGCGGAAAGGCCTGGGAGACCAGGCACAGCGACGACGTGCTGACG
GCCGCCGCCCGTCCCCCGCTCACTCTCGCCACCGCCTCCTACAACTCAGAACTCATTCTG
TGGAAGCTCGAGACGGGACAGCCTTACAGGTTATACGAGTAG
Protein sequence:
MANDCEVKSIMSISSKSEGSTAPLSRIRWRNAPLHERCSMADMVKIKEAFQAAYRNKMLP
TEFRNLLRTLLNVEYDDDEFNILFMKINTARNGEIDWDELVSHLLLGYFGNDPENQRASL
QLPIMGLPTVMRSQHRHPISRICFCPDDRSTDPMQGNYITASRDGMINWWSLDMSLLRTA
FSSSPHLKVRTTWVTDMVCMPDVNIIVTSSTERDLRFYDCTAKTFTLKIVITSWEYMICS
MYYHFYKDPNERCILILGDVGGHVRVLTFSPIKRGPFRNQPGRALQQLRHVDLQRRPHLL
PELRLTEKGRVHGEWVRQVSFYSSLHCIVSCATCPDSLLMCDLAGSKTYNMFHVEKGIQC
FTFDEEAHILATGGPDCTVRVWSPFVPRAASVSLTGHHAAVTALVLQISATTLLYSLSRD
RVIKVWDVQGQVCLQTYIDIPPQVGERTPISALYNPVTREFIVGAIKIAVVVLDEQLNPL
HTDGFTHSRAVSKILYNPLFKVVITCGLDSIIINWDPVTGKRNAMVRDAHTRLLHGESIP
VEITAACFDPGYQLLLTGARNGTLKVWNFNTGICLRSMAIEHMCEVTSCFWVEGRILAVG
WNRHVIEFEDAGGSGGSGGSGAVEGGGKAWETRHSDDVLTAAARPPLTLATASYNSELIL
WKLETGQPYRLYE