New model in OGS2.0 | DPOGS209463  |
---|---|
Genomic Position | scaffold24:+ 104170-117162 |
See gene structure | |
CDS Length | 795 |
Paired RNAseq reads   | 120 |
Single RNAseq reads   | 565 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012229 (5e-29) |
Best Drosophila hit   | Ets at 21C, isoform A (2e-38) |
Best Human hit | Friend leukemia integration 1 transcription factor isoform 1 (1e-29) |
Best NR hit (blastp)   | GH10509 [Drosophila grimshawi] (5e-50) |
Best NR hit (blastx)   | GH10509 [Drosophila grimshawi] (2e-39) |
GeneOntology terms    | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0003677 DNA binding GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0048813 dendrite morphogenesis |
InterPro families    | IPR000418 Ets IPR013761 Sterile alpha motif-type IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR003118 Sterile alpha motif/pointed IPR010993 Sterile alpha motif homology |
Orthology group | ND |
Nucleotide sequence:
ATGGAGTCCCCGCTGCCGGCCCACGAACAAGAGGACGATTCCGAGGACGACACCGTGCCC
GCCGACCCTGAGAAGTGGCAATGTGGTGACGTGGTGCGCTGCGTGCGGTGGGTGTCCCGT
CAGTTTTCGGTGCCCGCGCCTCGGACCCACCTGCTGCCGTCCAGCGGCGCCGCGCTCCTC
GCCCTCACCGCCGACAACTGGCTCCAGGTGTGTTCCGGGAACGAGCAAGCTGCCCGTATC
TTCCAGGCGTACGTGGCTCACGCTCATGCCGCGGCCAAGGGTCGCCCGCCGCCTCCTCAG
CTACCGGAACATCAGACCTCGAGCTCGCAGGGACTCTCGCAGCAGACCGAGCCTTACCCG
TTGAGCGGCTGTGTCCGGGGCGGCGGAGGCCAGGTGCAGCTGTGGCAGTTCCTGCTGGAG
GAGCTCGCGGCCGGCGCTCCCGGGATATGTTGGGAGGGCTCCCCGGGGGAGGGCGAGTTC
CGGCTGTGTGACCCGGACGAGGTCGCCCGCCGCTGGGGTCGCCGGAAACAGAAACCACAT
ATGAATTACGACAAGCTGTCTCGAGCGCTCAGATACTATTACGATAAGAACATCATGACC
AAGGTTCCCGGCAAACGTTACGCGTACCGGTTCAGCTGGGCCGGGCTGGCGGCGGCGTGC
CAGGCTCAGGCGGCGGAGGCGCCCCCGTACTGGCACTACCTCGCCCGGGGACCGCTCCCT
GCACCACCGGCATCGGCTCCTGCTACGGAACCCGAGTCCTTACCGGCACACGCTCCGAAC
TCACAAACTCTGTGA
Protein sequence:
MESPLPAHEQEDDSEDDTVPADPEKWQCGDVVRCVRWVSRQFSVPAPRTHLLPSSGAALL
ALTADNWLQVCSGNEQAARIFQAYVAHAHAAAKGRPPPPQLPEHQTSSSQGLSQQTEPYP
LSGCVRGGGGQVQLWQFLLEELAAGAPGICWEGSPGEGEFRLCDPDEVARRWGRRKQKPH
MNYDKLSRALRYYYDKNIMTKVPGKRYAYRFSWAGLAAACQAQAAEAPPYWHYLARGPLP
APPASAPATEPESLPAHAPNSQTL