| New model in OGS2.0 | DPOGS209464 |
|---|---|
| Genomic Position | scaffold24:+ 122047-123829 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 354 |
| Single RNAseq reads | 1026 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | neuronal acetylcholine receptor subunit beta-3 precursor (1e-06) |
| Best NR hit (blastp) | neurotransmitter gated ion channel [Aedes aegypti] (1e-19) |
| Best NR hit (blastx) | PREDICTED: similar to nicotinic acetylcholine receptor alpha 7c subunit [Strongylocentrotus purpuratus] (2e-10) |
| GeneOntology terms | GO:0005230 extracellular ligand-gated ion channel activity GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0006810 transport GO:0004872 receptor activity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0030054 cell junction GO:0016020 membrane GO:0005216 ion channel activity GO:0045202 synapse GO:0045211 postsynaptic membrane GO:0006811 ion transport GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0019717 synaptosome GO:0042166 acetylcholine binding |
| InterPro families | IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR006201 Neurotransmitter-gated ion-channel |
| Orthology group | ND |
Nucleotide sequence:
ATGGAACCGACGGCTCGAGGCAGTGTCCTCCGGCATCCAGACTTTAAAATGTTTTCCGAA
CACAAGTTCATCACGATCATCTTCCTTCTGTACGGTGTAAGGTTGGCAAGTGGCGATTGC
AACAACGTGACCCAGCTGTCGACACAGCTGGACCTGCTCCTGGCGGAGTACGAGCGAGCA
GCTCCCCCCGCCGCCCCCGCAGACGTAGCGGCGGCCCTGGAAGTGCGACACGCCACCGTC
AACGAGAGAGACGCTACCGTCAGGCTGCTCGGCACCATGTACCTGAGCTGGGAGGACAAG
CGTCTATCTTGGAACGCGAGCGGTTGGGGCTGCGATAGCACGTTAGTATCAGCGGAGCGT
CTGTGGCGGCCCGAGGTGCGCGTGCTGAGCGCGGCCACGGCGGGAGTAGACGGCGGCGCG
GGGCCCCGGGCTCGCCTCACCAGCACCGGCCTCGTGTCTTGGCCTGTGCCAGTGGACCTG
CTGGCTCCCCTCACGCTCACTCTCAGAGACTGGCCGAACGACAACCAGCAGATCGTGTTC
AAATTCGGTTCACAATCACACACCGTGGAAGAGTTGAAACTGACCGTCAGCAAAAAAGAG
CGGTCGACCGTATTTGAGTCTGGAACGTGGGAGCTGATGTCGATCCAGAGCGCCGAGGCG
AGCTGGCGCCGGCTGGACTCCGAGCACAGCATCTTATCGTGGACATTGAGGCTCCGGCGG
CGGGCGGCAGCTCACAGTCTGTCAGCCAGCGCCATCCTCGCCACTGCCGTGTTGCTGCTG
GTCGGAGCCGCCCTGCTACCGCCGGAGACACGCGCTCCACTTTGTGCCATAGCCGCTTTA
ACTGTCTCATTATGGTTAATCTCCAGCCTCCCTCGCCTGGGAAGTGCGTCATCGGCTCCG
CTAGTCATGAGTCTGTTCTGTGTCGTGAGCTGCGTGTCCTCGCTGGCGGCGGGGGGCGCA
GCGCTAGTGCTCCGCGTGAGCCGCTGCTCCGCTGCTCCACCACCAGCCCTGCGCAAGTTA
CTCACCACCGCCTCGACCTTCTGCAATCTTGGTCCTTCAGAGTCGAGCGGTGCGGAGTAC
AGCGCGTGGGCGGCGGCGGCCCAGCTGCTCGACTATGGACTCCTGACTTCGTTCGGGCTG
ACGCTCATAGTGGTAGTGTGTCTCTACCTCTAG
Protein sequence:
MEPTARGSVLRHPDFKMFSEHKFITIIFLLYGVRLASGDCNNVTQLSTQLDLLLAEYERA
APPAAPADVAAALEVRHATVNERDATVRLLGTMYLSWEDKRLSWNASGWGCDSTLVSAER
LWRPEVRVLSAATAGVDGGAGPRARLTSTGLVSWPVPVDLLAPLTLTLRDWPNDNQQIVF
KFGSQSHTVEELKLTVSKKERSTVFESGTWELMSIQSAEASWRRLDSEHSILSWTLRLRR
RAAAHSLSASAILATAVLLLVGAALLPPETRAPLCAIAALTVSLWLISSLPRLGSASSAP
LVMSLFCVVSCVSSLAAGGAALVLRVSRCSAAPPPALRKLLTTASTFCNLGPSESSGAEY
SAWAAAAQLLDYGLLTSFGLTLIVVVCLYL