New model in OGS2.0 | DPOGS209476  |
---|---|
Genomic Position | scaffold24:+ 216236-226115 |
See gene structure | |
CDS Length | 2106 |
Paired RNAseq reads   | 1012 |
Single RNAseq reads   | 3897 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005854 (0.0) |
Best Drosophila hit   | CG16857 (7e-129) |
Best Human hit | immunoglobulin superfamily, member 9B (2e-43) |
Best NR hit (blastp)   | PREDICTED: similar to GA14181-PA [Nasonia vitripennis] (1e-151) |
Best NR hit (blastx)   | PREDICTED: similar to GA14181-PA [Nasonia vitripennis] (4e-141) |
GeneOntology terms   | GO:0007155 cell adhesion |
InterPro families    | IPR008957 Fibronectin type III domain IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR013098 Immunoglobulin I-set IPR013106 Immunoglobulin V-set IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold |
Orthology group | MCL15081 |
Nucleotide sequence:
ATGTCGTACGCTGCTGCTCCGTCGGCGGTGCTGCTGACGTCGCTACTGGTGCTGTCGGTG
GTGACGAGGGCATGCTGCTCTCTGCTGCCACTCGACACAGAGCGCCTGCGAGCGAGCGTC
GGTGGATACGCCGTCATGAACTGTCATCTAGATTTCCCTTTCGGAAACGAAATACCTTAT
CATCTGCAGTGGGAGAAAGACGGCGAGGTAATATTTTCGTGGTACAGCAGTGAGGGCAGG
GCGCAGCTGGCGGACCGCTGGGGCGGACGCGTGAGGAGGGTCTTTTCCCCAGGGCTCGGC
CGCGGCTCCGTCAACATCAGCTCCGTGAGGGAGACGGACGCGGGCCTCTACCGCTGTCGC
GTCACCTTCCCCAACCGCACGCCGCCGGCTCGTAACAACGGGACCTTCTATTACCTCGAC
GTCGACGGCGGCAACCTCATCGTCACTCCGCCCGTCAACGTCACAGTCCTCGAGGGTGAT
CGCGCCGAGTTGGAATGTCTGCCCAAGAGCCCGGAGTGGACGGTGCAGTGGTACCACGAG
GGGGTGCCGGTGGAGACGTTGCCCGAGTTTGCGCAGCGGTCGCAGTTGGCGGTTAACGGC
AGTCTAATAATGAAACAAGTCGTCAGCACTGACCTCGGCGAGTACGAGTGTCGTATCAGT
GCTGCTGACGGACAGACTCAGAGCGCTAGTGCCTTTTTAGATGTTCAATACAAGGCGAAA
GTTGTCTATTCTCCCAAAGAAAGGTATTTACCATATGGCAAATCGGCGAGCCTCGATTGT
CATTTCAGTGCGAATCCTCCTTTAACAAACCTACGATGGGAAAAAGATGGTTTCCTATTC
GATCCCTACAACGTACCCGGCGTATTTTATAGTATAAACGGTAGTCTGCTCTTTAATCAG
GTAGATGAATCCCACGAGGGAATGTACTCATGTACGCCTTACAACGTGCTGGGGTCGGCG
GGTCCGTCAGCCGAGGTCCGTGTGCGCGTGGCTCGTCCTCCGGCGTTGGTCGTGCGACCT
CTGCCTTTGTACTTGGTGAGGCTCGGAGCTACTGTCACGTTGCCTTGTGCCGTCGCCCGC
GAGCCGCATCACGCACCACCAGCCATTCACTGGATAAAGAAAGATGGAACTCCTCTGCCT
GAAGGACGTTATTCGCTAAGCGAAGGCAATTTGACCATCACTCAAGTATCGGAAGAAGAC
CGCGGTGTCTATGTGTGCTCTCTGAGTAACGAGGCCGACGAGCTTGCCGTTGAAACTGAG
TTGTTGTTAGAAAACGTACCTCCGCGTGCGCCCTACAACCTCACGGCCAAGTCCACTGCC
AACTCAATTCACCTGTCGTGGGTTCCAGGACACAATGGCATGGACGTCGAGTACAACGTG
TGGTACCGCGAGCGAGCGGACAGCGAGTGGCGCACAATGAAACTCTTGTCGCGAGGCTCG
ACTCATGCTACGTTGCTAGCGCTTCGCCCCGCCACCGAGTACGAACTGCGAGTACTCTCA
CAGGATCACATCGGCGACGGTTTATTTAGTAAACCGATATTCGTGCGGACCCTAGATTCT
GATCCCGGTGAAGATAGAAGTACTACAGCCGGTGTTTCGGCCACTGTAACAGAAGGCATT
ATGAACACGGGCACCTCTTGGAGTAGTGCAACCAACGAGGCGAGCGGAGCGACGCTCGGC
TCGGTGAGTGGTTCGGTCGGAGGTCCGATCGGAGGGTCGGGCACCTTGGACGAGCTCGGG
GTTACCGTCCGGCTCATCGAGGAAGGAGCGCTGATCCGATGGAGTCGCGCGCCTGGAGAC
GACACACTCTGCTCAGTGCGTTGGTACGACACCGACGAACCGCAACATAAACTTATAGCT
GTCTTTTCGACGCATCAAGATTATATTCTCGTGAGTCCAGTAGTGGAGGGTGCGGGTTAC
TGGGCCGGCGTGGAGTGCGGCGAAGTCATCGGAGGCACGGGTGTGCAGGTCCCGCAGTAC
ACCCGCCTGCGGGGAGTAGCGGCAGGGTCCGCGGCTGCGGCGCTCCTGCTGGGAGCCCTG
GCCGCCGCCCTGTGCCTGGCCCGCCGCCGCCTGCGACCTCACGCCCGCGACAAACGCTCC
CGCTAA
Protein sequence:
MSYAAAPSAVLLTSLLVLSVVTRACCSLLPLDTERLRASVGGYAVMNCHLDFPFGNEIPY
HLQWEKDGEVIFSWYSSEGRAQLADRWGGRVRRVFSPGLGRGSVNISSVRETDAGLYRCR
VTFPNRTPPARNNGTFYYLDVDGGNLIVTPPVNVTVLEGDRAELECLPKSPEWTVQWYHE
GVPVETLPEFAQRSQLAVNGSLIMKQVVSTDLGEYECRISAADGQTQSASAFLDVQYKAK
VVYSPKERYLPYGKSASLDCHFSANPPLTNLRWEKDGFLFDPYNVPGVFYSINGSLLFNQ
VDESHEGMYSCTPYNVLGSAGPSAEVRVRVARPPALVVRPLPLYLVRLGATVTLPCAVAR
EPHHAPPAIHWIKKDGTPLPEGRYSLSEGNLTITQVSEEDRGVYVCSLSNEADELAVETE
LLLENVPPRAPYNLTAKSTANSIHLSWVPGHNGMDVEYNVWYRERADSEWRTMKLLSRGS
THATLLALRPATEYELRVLSQDHIGDGLFSKPIFVRTLDSDPGEDRSTTAGVSATVTEGI
MNTGTSWSSATNEASGATLGSVSGSVGGPIGGSGTLDELGVTVRLIEEGALIRWSRAPGD
DTLCSVRWYDTDEPQHKLIAVFSTHQDYILVSPVVEGAGYWAGVECGEVIGGTGVQVPQY
TRLRGVAAGSAAAALLLGALAAALCLARRRLRPHARDKRSR