| New model in OGS2.0 | DPOGS213864 |
|---|---|
| Genomic Position | scaffold256:- 68714-72339 |
| See gene structure | |
| CDS Length | 1563 |
| Paired RNAseq reads | 1308 |
| Single RNAseq reads | 3817 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | brahma associated protein 60kD (1e-164) |
| Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform a (2e-156) |
| Best NR hit (blastp) | brg-1 associated factor, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to brg-1 associated factor [Tribolium castaneum] (1e-176) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0016585 chromatin remodeling complex GO:0003713 transcription coactivator activity GO:0005515 protein binding GO:0035060 brahma complex GO:0045893 positive regulation of transcription, DNA-dependent GO:0048813 dendrite morphogenesis GO:0007517 muscle organ development GO:0048666 neuron development |
| InterPro families | IPR003121 SWIB/MDM2 domain IPR019835 SWIB domain |
| Orthology group | MCL10975 |
Nucleotide sequence:
ATGGCCCAACGATTCCCTGCGAGTGGGCCGAGCCCGGCGCCGCCTGCGGGGTCCATGCCG
CCTCAACAGCGTTATCCTGGGCCCGCACAGCCACCGGGCTCGCCGATGCCTCCGCGTCCT
TATGCTGGCCCTACTTTTCCTCCCCGCAGCGGGTTCACCCCCCCGCCGGCGGGCGCAGGT
CCGGTGTCAGTGGGAGTGTCTCGCCCCGGCGGGCCCGCTCAGTACCCGGGCGGCGCGGGA
CCTCCGCCCGGCGTCCCCCGCCCGCCTGCGCCCGCGCCCTCTGTCAAGCGACCACCGGAC
CAACGCGCTCCTCTCCCGCCGCCACACAAGACACACTACGGAGGCGAGAGTTACGTGGCG
GCCGGCAAGCGGAAGAAACGACTCGCGGACAAGGTGCTGCCGCAGAAGGTGCGCGACCTC
GTGCCGGAGTCTCAGGCCTACATGGACCTGCTGGCCTTCGAGAGGAAGCTGGACGCCACC
ATCATGAGGAAGAGGCTCGACATACAGGAGGCGCTTAAGAGACCCATGAAGCAGAAGCGG
AAGCTGCGGATATTCATATCCAACACATTCTATCCCGGTCAGGGCGACAACGCGGTCGCC
TCCTGGGAACTCAGAGTGGAAGGTCGTCTCCTCGACGACTCCAAAAATGATCCAAATAAG
AGCGGTCGTAAACGCAAATTCTCGTCGTTCTTCAAGTCTCTGGTGATCGAGTTGGACAAG
GAGCTGTACGGACCCGACAACCACCTGGTGGAGTGGCACCGCACGCTCACCACCCAAGAG
ACGGACGGGTTCCAGGTGAAGCGGCCCGGCTACAAGAACGTGCGCTGCACCATCCTGCTG
CTGCTGGACTACCAGCCGCTGCAGTTCAAGCTGGACGCGCGCCTGGCGCGGCTTCTCGGC
GTCCACACGCAGGCTCGCCCCGTCATCGTCAACGCGCTGTGGCAGTACGTCAAGACCCAC
AAGCTGCAGGACCCGCACGAGCGCGAGTACGTCGTCTGCGACAAGTACCTCGAGCAGATC
TTCGGCTGCGCGCGCATGAAGCTGGCCGAGGTCCCTGCGCGCCTCGGGGCCCTGCTGCAC
GCGCCCGACCCCATCGTCATCAACCACCTCATCTCCGTGGAACCTCCGCACGACGCCAAG
CAGACGGCCTGCTACGACATCGACGTCGAGGTCGACGATACGCTCAAGGCGCAGATGAAC
AGCTTCCTCATGAGCACCGCCAACCAGCAGGAGATACAGGGGCTCGACTCCAAGATACAC
GAGACGGTGGACACCATCAACCAGCTCAAGACGAACCGGGAGTTCTTCTTGAGCTTCAGC
AAGGACCCGCAGCAGTTCATCCAGAAGTGGCTGGTATCTCAGTCCCGCGACCTCAAGACC
ATGGGCGGCGGCGGCGCTGGCGGGGGCGGCGGGAACCCTGAAGAGGAGCGGCGGTCGTCA
TTCTACTCTCAGGCGTGGGCGGGCGAGGGCGTGGCGCGGTACCTGCACGGCCGCCTCGCC
GCGCGCCGCAGGGACCTGGAGCACGCGCTGGCCGGCCCGCACCATCACCTCACCCGCCTC
TAG
Protein sequence:
MAQRFPASGPSPAPPAGSMPPQQRYPGPAQPPGSPMPPRPYAGPTFPPRSGFTPPPAGAG
PVSVGVSRPGGPAQYPGGAGPPPGVPRPPAPAPSVKRPPDQRAPLPPPHKTHYGGESYVA
AGKRKKRLADKVLPQKVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQEALKRPMKQKR
KLRIFISNTFYPGQGDNAVASWELRVEGRLLDDSKNDPNKSGRKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRTLTTQETDGFQVKRPGYKNVRCTILLLLDYQPLQFKLDARLARLLG
VHTQARPVIVNALWQYVKTHKLQDPHEREYVVCDKYLEQIFGCARMKLAEVPARLGALLH
APDPIVINHLISVEPPHDAKQTACYDIDVEVDDTLKAQMNSFLMSTANQQEIQGLDSKIH
ETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKTMGGGGAGGGGGNPEEERRSS
FYSQAWAGEGVARYLHGRLAARRRDLEHALAGPHHHLTRL