| New model in OGS2.0 | DPOGS213871 |
|---|---|
| Genomic Position | scaffold256:- 3672-6633 |
| See gene structure | |
| CDS Length | 1923 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 5 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Gag protein [Bombyx mori] (7e-26) |
| Best NR hit (blastx) | Gag protein [Bombyx mori] (7e-27) |
| GeneOntology terms | ND |
| InterPro families | IPR001878 Zinc finger, CCHC-type IPR013084 Zinc finger, CCHC retroviral-type |
| Orthology group | MCL10285 |
Nucleotide sequence:
ATGGGCGTCTTGCCGTGCTGGAGTCACGGCCCCCGCGGGAGGAGGTCGCCCGCCCTCCCC
TTGCAAAACGCAGGTCTCAAAGAGGAGGTGCGCGCTCAGTGGCAGCAGTTTGAGGAGTTG
CGGAGGGAGCGGGCAACTGCTGCAAAGGCGGCCTCAGATGCCCAGATCGGCCAGGACCAA
CTCCAGGTCTTGGAGGCAAACGTAGCTAAAATGGTTGGCAACCTGGTCGATGGGCGGCTT
GCCGTGCTGGAGTCACCGCCCCCGCGGGAGGAGGCCGCCCGCCCTCCCCTTGCGGGTGAA
AACTCGGCCGTCGCCGTGGCGGCCAAGAGGGCGATTCGCCAAGCGGCTCTACAAAAAGGG
GCCAAGACATCGGCCCCTTTGCCAGCACCATCGGCGCCGCCAGTTCAGACAAGGCAGACG
CTTTGGCCGCAAAAGTCCGCACTGGCGGAGGAGGTGGAGGTGTCGAGGCCTGTGCAGTTC
TCAAAACTGAGAGTCACGTGCCTCAACGACGTGACGACCGCGGATCGTTTATTAGCCGCG
GTCGCGCAGGAGGGGGGCTGCACCGAGGCCCAGGTCAGGGTGCGCAACGTGCGACCTGGG
TCTAGCGGCACAGGCTCCGGCCTGTTGGAGGTACCGGCTGCGACGGCCAAAAAGCTACTG
CAGCTGGATAATATATCGGTGGGGTGGAGCCAAGTGTGGTTCTCGTATATGGAGGCACGA
CCCAAGCACTGCTTTAAGTGCTTGGGAATGGGGCATGTAGCGGCCGCGTGCACCAGTCCA
AAAGACCGCAGGGGCTTGTGCTACCGCTGCGGCAAGGAGGGCCACAAGTCCGCCCAGTGC
TCCGCGTCACCGCGCTGCGCTGTGTGCGCGGACGCTCACAAGTCCGCCCAGTGCTCCGCG
TCACTGCGCTGCGCTGTGTGCGCGGACGCGAGTAAGCCGGCTGACCATGTGAAGGGGGCC
ATTCGTGCCGCCCCCCATCCATCCGTGGGAAAATCCCGGCCCAGCAGAAAAGGGCGGGGG
TTTCGAGGCAGGCGTCGGGAGCTGAGATGTCCGAATAATGGACGGACATCTCAGGTTCCT
GCAGGCCAATTCGTTCGCTACTCCGTCCATCGCAAGCAGAGTGGAGAGATGGAGGCTAGC
TGCGCATCTTCCGCGGCTTACATACGTTGTGTGGACCTCGGGACGGACTACTCCGACACC
GAGTCCATCAAGAGCGTGTCGGACTGTGGTTCGACCCGCCGTGAGTCGAGGAAGCGATTC
CTACGGCAGAAATCCGGGGGTTCCCCTGACACAATCGGGAGGCCGGCAAAACGGGCTGCC
GTGCAGGCGGACTTGGATGAAAGAATCGCCTCCAAGGAGAAGCTGGCGCAGACCACCAGA
GTCAAGGCCGGCTACGACGCCTCCACCGTCATTTACGCGGACCACTCCGTAGAGGAGATG
GAGCGCATGGCTCTATCATGGTCTCAACTCACTAAGCTAATAATCTGGCTATCGGAACAC
GGCCGACATACTGTCTCGACCTGTCCCCACTGGACTGGACAACGTGTGGATCTACGAGCC
GCCATCGGGCATGACATCTCGCCGCCAGCTATCCTTAAATCTATGCTGAGCAGCGAATTA
AACTGGACTGCGGTCGCCACCTTTGCAGAGGAGGTGATGGCTGCCAAAGAGAAAGAGAAA
GGTAGGCGCTCGATACCTGTACACGTCGGCCTAGACGAAGACGTGCGGTCAATAACACCG
ACGGCCGCAACGTCCCGCCTTAGCCGGGGTTCTCGAGGTGGCGGTGTGGGGACACCGGCG
CCTTATTGTAACGAGTCCCCGGGCGGACCGTTTTGCGCAAACATTCCTTCGCATCGCGGC
GAAGCGACAAAAGGCTTATGCAAGCCCTTGGGGGTCTCTGTTAGAAGTCTGAGGGGCACC
TAA
Protein sequence:
MGVLPCWSHGPRGRRSPALPLQNAGLKEEVRAQWQQFEELRRERATAAKAASDAQIGQDQ
LQVLEANVAKMVGNLVDGRLAVLESPPPREEAARPPLAGENSAVAVAAKRAIRQAALQKG
AKTSAPLPAPSAPPVQTRQTLWPQKSALAEEVEVSRPVQFSKLRVTCLNDVTTADRLLAA
VAQEGGCTEAQVRVRNVRPGSSGTGSGLLEVPAATAKKLLQLDNISVGWSQVWFSYMEAR
PKHCFKCLGMGHVAAACTSPKDRRGLCYRCGKEGHKSAQCSASPRCAVCADAHKSAQCSA
SLRCAVCADASKPADHVKGAIRAAPHPSVGKSRPSRKGRGFRGRRRELRCPNNGRTSQVP
AGQFVRYSVHRKQSGEMEASCASSAAYIRCVDLGTDYSDTESIKSVSDCGSTRRESRKRF
LRQKSGGSPDTIGRPAKRAAVQADLDERIASKEKLAQTTRVKAGYDASTVIYADHSVEEM
ERMALSWSQLTKLIIWLSEHGRHTVSTCPHWTGQRVDLRAAIGHDISPPAILKSMLSSEL
NWTAVATFAEEVMAAKEKEKGRRSIPVHVGLDEDVRSITPTAATSRLSRGSRGGGVGTPA
PYCNESPGGPFCANIPSHRGEATKGLCKPLGVSVRSLRGT