| New model in OGS2.0 | DPOGS215261 |
|---|---|
| Genomic Position | scaffold216:- 217171-218869 |
| See gene structure | |
| CDS Length | 1566 |
| Paired RNAseq reads | 116 |
| Single RNAseq reads | 440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013961 (9e-46) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | TRAS3 [Bombyx mori] (8e-51) |
| Best NR hit (blastx) | TRAS3 [Bombyx mori] (8e-50) |
| GeneOntology terms | ND |
| InterPro families | IPR005135 Endonuclease/exonuclease/phosphatase IPR001878 Zinc finger, CCHC-type |
| Orthology group | MCL22693 |
Nucleotide sequence:
ATGAAGCTTCGAAGTAAACCAGAGGATCTGGTGCGCACCCTCCTGCGACAAAACACGGAA
CTCCACACATTCAAAGACAACGACATCACTTTCCGCTTCAAAAGAGGCAACAACAGAAGC
ACTTACTTGTACAACGCCGTCCTTGTGGCTAATCCAGCTATCTGGAAATTCATCGTCAAA
ATGGGGAGAGTCTGCCTGGACTTCCAGAAGGTCCACGCGGAAGACTTTTCCCCATTCTTA
CAGTGCCAGAAATGCCTCAGCTTCGGGCACGTGAAGAAACACTGCCGGACTGAAGTCACA
CGATGCTCGCACTGCGCATCAGACACCCACACACTAGACCAATGTCCAACCATGGATACT
CCGCACCCTCCTAAGGTTTTCAACTGTACCCAACACAAGTGCAACCTAGACAGATCCAAA
CACTCTCTTAAAGAGTTCATCACATATTTTATCAATAGCGAACACAACGTAGCCTTGGTG
TCCGAGCCGTACACGGGAAAAGGTATCGAGATCGGGGCCTTTAGAGGGCTGGATATCTTT
CAGTTCCCTAGCGGACCCGATGGGAAGGTCAAGGCGTGCATATTGGCCAAAACCAAGACC
GCATTCCTCGGGCTCTCCCAATTCTCTACCCCTAACCTATGTGTGGTTCGGGCACTACAC
AGACACCAACAGATACTCATCGCCTCCGTCTACATCGAGCCCAGTGCCGATGAGGCGGAT
ACACTACACTCACTAGAACACCTTCTCAGCAACAACACCAACACCCGCTGCATCATCGGT
GGCGACTTCAATGGTGGGCACCCACTCTGGGGGAGCGAACGCATGAACGCAAGAGGGAGA
GATATCATCGACCTCTCTCTCATTCACGATCTTCAGGTGTGCAATGTGGGCAATACACCC
ACATTCGAAACTATCACCCACGGCCACGCGCGCTCCTCCATAATCGACATCACACTTGTC
TCGTCACTAATCTACGGACAAGTATCAGACTGGAAGGTGAACCTGGACGCTTGTCCCTCA
TCGCAACACAACGCAATCGACTACACATATACACACTCGCATTCTCAAAACAAATCACAG
ACTTCTCAACATCTCAACACAACCACCTTCCTTTACAAGAATAACAAAGCGAATTGGCGC
CTCTTCAAGGAGTCAATTCTCACACAATTCACGAGCAGTGACACATCTGAATTAGACATC
CAAGCACTGGACACTGGACAACTTGAATCTCTTATCGACACCATCACCGAATGTATACAC
ACCGCCTGCAGGGACTCCATGCCCGTCAGATCGGCCGGAGCGAAATGTAAACCTCCTTGG
TGGACAGAGGCCTTAGAGGCTCACAAGCAGGAGGTCATACACACCCATCACAAATTACAC
GCGGCCAAGAAATCCCACCAACCGGTGGATGCCCTGGCCCGACAGCTACACACCCTCAGA
GAGCGATACGCCGCCGCACTTAAAGCGGAGTCGACCGCCCACTTCAAGGAATTCTGTGAA
CTCCAAACGAAGGAGAATGTCTGGTCTCTGACCAACAGACTTCTCAGGGAATCGGCTCCA
CGATGA
Protein sequence:
MKLRSKPEDLVRTLLRQNTELHTFKDNDITFRFKRGNNRSTYLYNAVLVANPAIWKFIVK
MGRVCLDFQKVHAEDFSPFLQCQKCLSFGHVKKHCRTEVTRCSHCASDTHTLDQCPTMDT
PHPPKVFNCTQHKCNLDRSKHSLKEFITYFINSEHNVALVSEPYTGKGIEIGAFRGLDIF
QFPSGPDGKVKACILAKTKTAFLGLSQFSTPNLCVVRALHRHQQILIASVYIEPSADEAD
TLHSLEHLLSNNTNTRCIIGGDFNGGHPLWGSERMNARGRDIIDLSLIHDLQVCNVGNTP
TFETITHGHARSSIIDITLVSSLIYGQVSDWKVNLDACPSSQHNAIDYTYTHSHSQNKSQ
TSQHLNTTTFLYKNNKANWRLFKESILTQFTSSDTSELDIQALDTGQLESLIDTITECIH
TACRDSMPVRSAGAKCKPPWWTEALEAHKQEVIHTHHKLHAAKKSHQPVDALARQLHTLR
ERYAAALKAESTAHFKEFCELQTKENVWSLTNRLLRESAPR