| New model in OGS2.0 | DPOGS215260 |
|---|---|
| Genomic Position | scaffold216:- 215455-217041 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 52 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013207 (1e-10) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | non-LTR retrotransposon CATS [Bombyx mori] (7e-17) |
| Best NR hit (blastx) | non-LTR retrotransposon CATS [Bombyx mori] (4e-17) |
| GeneOntology terms | ND |
| InterPro families | IPR012337 Ribonuclease H-like IPR002156 Ribonuclease H domain |
| Orthology group | MCL18140 |
Nucleotide sequence:
ATGAGGGAACTTCCTGAGACTCCGGATGACCCCCCTTTTACTGAGGGGGAGATTCTGGAG
GCACTCAAGGGAATGCACCCGAAAAGAGCACCCTACTCGCGGGTGATCCAGCCTATCATT
ACATACGCAGCTGGAGTGTGGGGACACGTGGCCGATAAGAAGTGCGTGAGGAAGAAACTC
CTGTCTATGCAGAGAGCCTTCGCCCTAAAGGCCATCAGAGGATTTAGGACAGTGTCCATC
TCTGCTGCTCTCGCACTCGCAATCCCGTCAAACCGCAGTAAGACACACCCCTGGGTTGCT
AAAATACACTCGACAGTACACCACACATCCGGGTCCATCGAGTTCGCGTGGGTCAAGGCC
CACGTGGGCATTGTGGGGAACGAGGCCGCAGACACCGCTGTCAAGCGGGCGGCTAAGCTT
CACAAAGCTCCGGACTACACACAATTTCTTATCACCTTTATTAAACACTCTACACGATCA
CTCCACACCTCAGTCTGGCAGTCTCGATACGAGAGTGAGCCACAAGGACAACATACTAAA
GAACACGTCCCTACAATTAAACACATCATTAAATTACACTCACTTGCTCACAACACATTT
ACACTTACCCAAACACTCACAGGACACGCCTACAGAAAACAATATTTACACCGGGTTAAG
GTCACGGAGGATGCTGTCTGTCCGTGCGATGGCACGATGACGGTGCAGTCAATGGGTCAC
GTGCTCGAGGACTGCCCGCGGTTCATCGCCCCGAGAGTAATTTGTCGACGTGACTTTGTA
AATTGA
Protein sequence:
MRELPETPDDPPFTEGEILEALKGMHPKRAPYSRVIQPIITYAAGVWGHVADKKCVRKKL
LSMQRAFALKAIRGFRTVSISAALALAIPSNRSKTHPWVAKIHSTVHHTSGSIEFAWVKA
HVGIVGNEAADTAVKRAAKLHKAPDYTQFLITFIKHSTRSLHTSVWQSRYESEPQGQHTK
EHVPTIKHIIKLHSLAHNTFTLTQTLTGHAYRKQYLHRVKVTEDAVCPCDGTMTVQSMGH
VLEDCPRFIAPRVICRRDFVN