| New model in OGS2.0 | DPOGS210324 |
|---|---|
| Genomic Position | scaffold1126:- 7859-27015 |
| See gene structure | |
| CDS Length | 5256 |
| Paired RNAseq reads | 101 |
| Single RNAseq reads | 288 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011962 (0.0) |
| Best Drosophila hit | CG31665, isoform B (4e-08) |
| Best Human hit | protocadherin Fat 1 precursor (2e-12) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC003136 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC003136 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005509 calcium ion binding GO:0005515 protein binding GO:0005886 plasma membrane GO:0007015 actin filament organization GO:0007155 cell adhesion GO:0007156 homophilic cell adhesion GO:0007163 establishment or maintenance of cell polarity GO:0016021 integral to membrane GO:0016337 cell-cell adhesion GO:0030027 lamellipodium GO:0030054 cell junction GO:0030175 filopodium |
| InterPro families | IPR016187 C-type lectin fold IPR000859 CUB IPR000742 Epidermal growth factor-like, type 3 IPR001304 C-type lectin IPR006209 EGF IPR006210 Epidermal growth factor-like IPR001881 EGF-like calcium-binding IPR016186 C-type lectin-like IPR013032 EGF-like region, conserved site |
| Orthology group | MCL19626 |
Nucleotide sequence:
ATGCCAAGCAAACGTCGCAGACTGGAGCTAGTCTTAAATGAAGATGAATGTTACATAACA
GCACTCCAGCCAGTCATTACGTCATTAGAAAGACTTCAACAGAATTCAAAAACGTTGTCG
ACCGCACTTTTCATAATTACTAACTCTATACAACGGCGGGCTTTATCACAGTCGTGTATG
GACGTGAAACAGGTACTGTTCAACGGTTACTGCTACCTTTTCTCCGGCTACCCACAGGCT
TCTTGGTCAACCGCGAAACAGGTTTGTGAAGGTCTCAACATGCATCTGTCCTCGATACAT
ACAGCGGAAGAGGAGCGCTTTATAGTGACCGGTATCAGACAATCCAGCGATTACAGCGCT
GGATCCGTATACTGGCTCGGTTCCCGTCTAGACGATAATGCAATAAGTTGGATCGATGGA
AGCACTTTAGATTACCAAGCCTGGCCTCCTTATAATGACACCGAGGAAGTCGAAGACAGC
TGTTTAGGTGTTCAGTGGAAAACCTCTCCAGTACCCTCACAGCCATCGGGACTGTACTGG
ACTCCATACAAGTGCTCGGCCACTGGTGGCTACGTGTGCAGGAGACGCCTCACATCAGAG
CACGTCCTCAGAAATACTACCGTCGAGGGCACTTCGGGTACATTAAGGAGTCCTAACTAT
CCCGGTCTGTATGACAACGATCTGGATTATTGGGTTCATGTCAGAAGTGCCCCGGACACA
CGCCTAGTATTCGTTTTCACATCCATCAACTTGGAATATCAAAACGACTGCCTTTATGAC
TTTATAGAGGTGCGTATTTTGATAGACTCAGAACCTTATTTCAAGTGCGACGATGCTCTG
AAACGCGTAAAAAGTTACGAGATCGTAAAGTCAGTTCGAAGTCATCGAGATACTGCGGTT
CGGTCGGAGAGACGAGATGGGTCGCCGCCACCAACGAAGCGATACTTCACTTTCATTCTG
ACTATAAAACCTCTCTTCAACAGTACCCAGGGTGCAGGTTTCTCAGTGAACTGGTGGGCG
GTCGAGCTGGCGGGATGCCCATCTCAGACGTTCACGTCCAAGGAAGGAATCATTCACAGT
CCTAATTACCCCCACTTTTTACTACCCGATATGGATTGTACAATCGACATATTTGCTCCA
GCGGGAAAAAGGGTGTACTTAAATATAAGTTTTTTTGATTTCGGTTATGGACAATTCGAG
AACGGAATTCCGAACAACGTGTCGGATGTCATATCCGAAGACAATTATTTAGAAATTCAA
GTCGACTCTCAAAGTCGACCTATAAGACCATTCCAAAATTCAAAAATTTTAACAAACGGA
CTGTTCGTGTCGCAATCTGAAATCATGAGAATACGACTGAAAACCGGAGAGAACGTTACC
GGGATCGGATTTCTTGCTCATTTCAAGACTGTGTGGCATTTAAATGCTTCCATCACGATC
AGTTTATCGAACGCCGGTCGTCTGGCTTCTATAAACTATCCAGAGATGGGTCCGTCCCGG
AGTACGCTCCGCATGCGACTGGTGGCTCCCCACGGGCACACGCTCGCAGTAGCGTTCAGT
TCCACTGCCCTTGTACCAGCTGGTGAATACCCATGTGGAAGGGAGGCAGGCTGGATCGAG
GTGGTTGATAGTTACACGGACAATAATGGCACACAATGGACTCTTTGCGAGGCGAACCTT
CGAAAAAGAGCCGTCGAGAGTGCTCCACTTGTCATCACCTCATATTTGCACTCATTGATA
GTGACGCATCACTCTGGTGAAGAACCTATGGGACTAGACGTAGCTGTAGTAGTAAATATT
GATACAGAATATCACAATAAGGTTCTCCTACTACCGGATGAAACTAATTTAGAGTCCTGT
TACCCGAACCCGTGTCTGCACGGTGGACAATGCGCTTTTGAAGATTCCAGAAACATGTGT
CAATGCTCAGGATATTATACAGGTGTTTTCTGTCTCCTGACTGCATGCGAGCGATCCCCC
TGTGTGAACGGTAACTGTTCGCTGGCGGCGGACGGTGCGCTGTGTGCCTGTGCTCGTGGC
TGGAGAGGCCGGCGCTGTGCCGAGCGAGTGAGACCTTGCGCAGCGCGGCCCTGCAACCAC
CGGGGGGCTTGCGTTGAAAGGGACGCCGGCTTCTTGTGTCAGTGTAACCCTTCATGGAAA
GGAAAAAGATGTGAAATACCTAATCCTACGCCAAATATCGTAGGTTTGGGTACAAGAATG
ATGCAAGAACCATTTTGGCTCGGTTTATTCGCTGTTTTCGTCGTCCTCGGTTTTATTGGC
CTAATTTGGTGTGGAAAAAGACATTTCCCTGAAAAGATAGAAAAACTCCTAGCTGAAGAA
GCCGACAGATGCGCGAGACGGGTGGCGGGTCCAGGGCCGGGGCCGGAGGCGCGCACACTG
CTCACGCGGCTGGGATCTCCTTCGCCTCGTAAAAAACGCAACAATTCAACACCAACAAAG
AAAAACGCAGCGGAGAAAAAACAGATATTACAGCAACTCATAAGCCCGGCGCCAGCTAAT
GATCACTCGAAGAAAATAAGTATGGGGGAATTAATACAGATGTCAGAGAAGAGAACACTG
AGTACAGTAGAGAGTGCCCCTGCGTTTGTAGAATATGGATTAGACATTAAAGACACGTCA
TTCGCTAGTGAAGCCTCGTCACCCTCCACGTCACCGTCAATGCGTCAAGTATCTGACCCT
AAACTGGAAAAGAAAGTGACGTTTGCAAGATTATTGAACAAAGTTTCAGCCGAAATGAGC
TCGAGTTCAGATGTCGATATGGTTAATACTATTGCAATTCCGATGGCCGTCATAGCTGAT
AGAACTATAAAGACAAAAGCCTCGAGCACTCCACCCTCACCTGGTGTAGAAGTAAGGTCC
CCCCATAGTACGTCAAGTAATCAAGGAAGCGACTCCCTGTCCAGTCTTGATTTGACCTTG
GCTAACGGTGCTATAAAGAAATTTTCTAGAGCACCAAAAATATCAAGCGCTGATTCCATA
CTCGCAATGTTCCGAAACTTTTCTTCGTCAGCTGCTATAGTTTCTCGCGCTTCCTCTGGA
GCTATATCCGCATCCAGCACACCCACAGCATCATCACCTCAAGACGACACCGTCGATGGC
GATGATCTGTCAATAGCCTCTTCACATATACCTTCTTTAGCACCCGATTCTCCCATTTCA
AGACCACACACAACTATCGAAATACAGGTTGTTGACCCACTAAGCTCTCATAAATCTTCT
ACATCTGGTAATCTCCTACACCCTCCATCCATCCTACTTGAAGTACCCAGTAGCATCAAT
AAGTGTCTGTCTCCTATTCGAGAACTCCCAACACCACTGCCAACTCCGCTCCCTACACCA
CTGCCAACCCCACTACCATCACCACGAATGCCACGGGTCAAACTGGAACAGGATATCAAA
AAAGATTCGGTAATTTCTTGCATATCACCAAGCGAAGACGAATTAGAGGAGATAAGATAT
GAGAAAGCTGAAAGACCAACAATGGGACTGAGATTAAAGCTTCGACAGCCGGCAGTGTGT
TCTGAAACCCCAACGCCGTCCACTCACGTCACGGACTCACCTAGCCCTAGTTTTACACAC
AGTCAGGACTCTGAGAGAGAAATGTCACCTCTCTCCCCCGCCCCGCCCTCGCTGAGAGTT
CCCGTCCTCACTATTGAACGACCCTCACCTGGATCCCCTCCACCGAGAAGAACCCCACCA
CATTTAGACTATCAACCACCGCCATTAATAACAGTCACATATAACCCCAGTGAAGAATCA
GATGAACCTATGTCACCAAGACCACCTCCGCCAACGGCAAATATGTGCTATCTGAGCCCC
TTTTCGATGTCGGCAAGAGGAGAGAGAGCACCATCAGAATCTAATTTGTCATCATCGGGA
TACAGTTCAATGGCAAGTCCTGGCCCGTCGAGATGTGGGTCTAGTAATCCCTTGTGTCCA
TCTGAAATGGAAGATCCTGGATCAGGAGGAGGTCCATCTTGTTTTCAATCTAGGCGGAGA
CCACTCATGAAGACAAATTCAAGTCCAGCGGGCTCTAATGATGGAGGCAATGAGAGAAGA
AGAGGTAGGTCTGATTCTGAAACACTTTCAGACGATCCATTGTTAGAATCCAACGACGAA
GGAATCGGTACGGATGAAAGAGTAGACGATGTTCCTTCAAGTGCAAAAGAAATGGAAACT
TTGACAGTGTTAAAAGAATGCTTAGATATACCACAAACAACTTTATGCTCCCCGAGCGGT
GTCACTAAATGTACCATCGTAAAGTGCATAAGTGTTGAACGAGGTTTAGATGAAAAGGCG
AGTCTTAAACCGCCAATTTTGTTCTCAGATTGTAGTAGACCATTGAGCCCTGTCAGTTCA
AGAAGTGAGAGTCCTTTAAGTGACAAAACTGGTTTAGGTAGATTCTCTCCACAATTTTAC
GGTAGACAACTACCTTTTACTGATTCCGATGGACTTTATGATTTTCCAAGTTCCGAATGC
GTTAAAGGCGGTAGTTGTAAGAGTGGGAGCGCATCTCACAGAAAAGCCGGTAGAAGAAGA
GACAGAAAAACGACCAGGACAACGTCACATGAGCCCACAGGAACTACTAAATCTACTCTA
CCACACATGCCGCACTCCATGCATAATTTATTAGAGGTGCCGTATGGCAATCGTGGTCGC
AAAGGAGGAAGAAGGAGATCGAGGTCTCAGGCGCCAGCTCTAGCTACCTCATCATCATCT
GAAGAGTCTGTGTCCAACGCATCCGTGGCCTCTGTGGCATCAGCTCGAGAACTCAGACTA
CCCGACTTGGAAATGCAGTATGTCTGTTCACAGCCTGAGCCTGTCAGAACTAAGAAGCCG
TTGAAGCGTCAAAAATGCCGAAGCTCTGAGGACACGTCGTCTAAAATATCATCAAGCTTG
GACCTAACCGAGGACTCGAAGAAACCGAATAAAATTAGCAAACTCCGGTCCATCGGAAAT
CAAATAAGATTTCTCCGTCGGTTAGAAAAAAGTTTAAAAATGAAAGAAAGCTACCCGGCG
ATCTCAGACGACGAAGGAGACGAGTCGTCCAGCGTGACGTCACCCTTGTTACAAGGTAGG
AAGGATCTGAACCGTATGACGGGCCACGCGATCTCCGCTCCTCTGCTGGGGGCTGCAAGA
CCAAAGATCTCGCGACAGAGACGGTACGAGAGATCCCTCCTTGGCGAAGACACGAGGACT
TTGAGTACTGCGCCTGGCTACGATAACTCCGATTGA
Protein sequence:
MPSKRRRLELVLNEDECYITALQPVITSLERLQQNSKTLSTALFIITNSIQRRALSQSCM
DVKQVLFNGYCYLFSGYPQASWSTAKQVCEGLNMHLSSIHTAEEERFIVTGIRQSSDYSA
GSVYWLGSRLDDNAISWIDGSTLDYQAWPPYNDTEEVEDSCLGVQWKTSPVPSQPSGLYW
TPYKCSATGGYVCRRRLTSEHVLRNTTVEGTSGTLRSPNYPGLYDNDLDYWVHVRSAPDT
RLVFVFTSINLEYQNDCLYDFIEVRILIDSEPYFKCDDALKRVKSYEIVKSVRSHRDTAV
RSERRDGSPPPTKRYFTFILTIKPLFNSTQGAGFSVNWWAVELAGCPSQTFTSKEGIIHS
PNYPHFLLPDMDCTIDIFAPAGKRVYLNISFFDFGYGQFENGIPNNVSDVISEDNYLEIQ
VDSQSRPIRPFQNSKILTNGLFVSQSEIMRIRLKTGENVTGIGFLAHFKTVWHLNASITI
SLSNAGRLASINYPEMGPSRSTLRMRLVAPHGHTLAVAFSSTALVPAGEYPCGREAGWIE
VVDSYTDNNGTQWTLCEANLRKRAVESAPLVITSYLHSLIVTHHSGEEPMGLDVAVVVNI
DTEYHNKVLLLPDETNLESCYPNPCLHGGQCAFEDSRNMCQCSGYYTGVFCLLTACERSP
CVNGNCSLAADGALCACARGWRGRRCAERVRPCAARPCNHRGACVERDAGFLCQCNPSWK
GKRCEIPNPTPNIVGLGTRMMQEPFWLGLFAVFVVLGFIGLIWCGKRHFPEKIEKLLAEE
ADRCARRVAGPGPGPEARTLLTRLGSPSPRKKRNNSTPTKKNAAEKKQILQQLISPAPAN
DHSKKISMGELIQMSEKRTLSTVESAPAFVEYGLDIKDTSFASEASSPSTSPSMRQVSDP
KLEKKVTFARLLNKVSAEMSSSSDVDMVNTIAIPMAVIADRTIKTKASSTPPSPGVEVRS
PHSTSSNQGSDSLSSLDLTLANGAIKKFSRAPKISSADSILAMFRNFSSSAAIVSRASSG
AISASSTPTASSPQDDTVDGDDLSIASSHIPSLAPDSPISRPHTTIEIQVVDPLSSHKSS
TSGNLLHPPSILLEVPSSINKCLSPIRELPTPLPTPLPTPLPTPLPSPRMPRVKLEQDIK
KDSVISCISPSEDELEEIRYEKAERPTMGLRLKLRQPAVCSETPTPSTHVTDSPSPSFTH
SQDSEREMSPLSPAPPSLRVPVLTIERPSPGSPPPRRTPPHLDYQPPPLITVTYNPSEES
DEPMSPRPPPPTANMCYLSPFSMSARGERAPSESNLSSSGYSSMASPGPSRCGSSNPLCP
SEMEDPGSGGGPSCFQSRRRPLMKTNSSPAGSNDGGNERRRGRSDSETLSDDPLLESNDE
GIGTDERVDDVPSSAKEMETLTVLKECLDIPQTTLCSPSGVTKCTIVKCISVERGLDEKA
SLKPPILFSDCSRPLSPVSSRSESPLSDKTGLGRFSPQFYGRQLPFTDSDGLYDFPSSEC
VKGGSCKSGSASHRKAGRRRDRKTTRTTSHEPTGTTKSTLPHMPHSMHNLLEVPYGNRGR
KGGRRRSRSQAPALATSSSSEESVSNASVASVASARELRLPDLEMQYVCSQPEPVRTKKP
LKRQKCRSSEDTSSKISSSLDLTEDSKKPNKISKLRSIGNQIRFLRRLEKSLKMKESYPA
ISDDEGDESSSVTSPLLQGRKDLNRMTGHAISAPLLGAARPKISRQRRYERSLLGEDTRT
LSTAPGYDNSD