| New model in OGS2.0 | DPOGS201342 |
|---|---|
| Genomic Position | scaffold8697:- 1691-5365 |
| See gene structure | |
| CDS Length | 2016 |
| Paired RNAseq reads | 711 |
| Single RNAseq reads | 1834 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003126 (0.0) |
| Best Drosophila hit | CG7262 (1e-100) |
| Best Human hit | nuclear pore complex protein Nup93 (7e-102) |
| Best NR hit (blastp) | nuclear pore complex protein nup93 (nucleoporin nup93) (dead eye protein) [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | nuclear pore complex protein nup93 (nucleoporin nup93) (dead eye protein) [Aedes aegypti] (2e-167) |
| GeneOntology terms | GO:0005643 nuclear pore GO:0006810 transport GO:0005634 nucleus GO:0015031 protein transport GO:0051028 mRNA transport GO:0055085 transmembrane transport |
| InterPro families | IPR007231 Nucleoporin interacting component Nup93/Nic96 |
| Orthology group | MCL11060 |
Nucleotide sequence:
ATGATCGGCCCATCTCAGAACTGGCTCGATTTGAAAAGAGCACCAGAACAGCCAAGTATT
GCTGATACACCAAAGAAGTTTGGTCACTCTATGCTGGATAATATTGAAGCTGCATATGCT
AGACAGGTTCAGTTGTACAATAAACTGGTATTTCAAGGCGCTAAATCCAAGACTGCTTTA
TGTCAGAAGTTTGCACAAGTCGCGGAAGAGTTTAATGACCCTAAAGTTAAAGAAATGTGG
GAGATAATAAAAACAATGGCCAACATCCCTGCTCTTGTGAGAGACGAAGATCCATTAAAA
GCCAGAGGTAACCCCACAATACAGCAATGTTTAATTAGTCAAGGGAAAAAATACTTAGAG
AGGAGATACAAACAGTACATGAGTGATGTAGTCAGAGCAAACCCTGGAGCAGCAATGAGG
GGAGGCGAGCCGGGAACGTTTCCCTTAGTAAGGGGTTTTGTAGGGCTGCGTCTTCAGGGT
CAGAATACACAAGGGTTGACGGATGGTGTGATTGATGATCGTCCATTGTGGCCTATGGTG
TATTATTGCTTGAGAAGTGGAGATGCTAATGCAGCATTACACTGTTTGAGGAAAGCTGGC
CGAGATCACGAGGAATTTATAGCAGCTCTAGAAGAATATATAAGAGAACCTGAGAAGCCG
TTAAGTGATAAGTTACAAACGGCAATCAACTTCCAATACAGGATTCAAGTTCGCAACTCT
ACAGATCCCTACAAAAGAGCTGTGTACAGTGTAATCAGATGCTGTGATGTCAGTGACGAA
CATTCAGAAGTCGCCCGTACGGCCGATGACTATCTATGGCTTAAACTGTCCATCATCAAG
ACTCGCCCTAACAATGAATCTGAATCATTTAGTTATTCGGACTTACAGAAGATGATTTTG
GAAGAATATGGAGAAACCCATTACCACGCGTATGAGAAGCCCCTTGTATATTTCCAAGTG
TTGACATTAACGGGTCAATTTGAACCTGCTATTGAGTTTTTATCAAGGATACCAAGATAT
CAAGTACATGGAGTCCATATGGCATTAGCTTTGCATGATGTCTATATGTTGGGGACACCA
AGAAATGTACAGGCGCCGCTATTGTCAGTGGATACAGATGATCCCATACCTCTAAGGCGC
TTGAACTTAGCTAGACTTATTTTACTTTATGTTAGAAAGTTTGAACTATCCGACCCGTCA
GACGCTCTCCACTATTACTTTTTCCTAAGAAATCTGAAAGACCCCAGTGGTAAGAACCTG
TTCATGTGTTGTTGCACGGATTTGTCGCTGGAGAGTCGAGACTATGAACTGCTTTTTGGA
AAGATGGATCCGGCCACCGGCCTTCGTTCAACCGGATTATTAGACCAGTTTAACAATCCT
AATATTGATAACACGGTCATTGCCCTCAATGTAGCCGAACAGCTGGTGAATAAAGGATTG
TTTGAAGACGCCATAATAGTGTATGACATTGCTGGAAACTTGGAGAAAGTATTGGAGCTG
TTCTGTGTATTGCTGGCCCAAGTTGTGAGTAGTGGTGGCGCATTACGAGAGCGTCTACGT
TCGCTGTCCGAGCACGTGTCGCGGCGTCTCCGTTCAGAAGAACTGCCATCTCCTCACCTG
GTCGACGCTTACAACAAACTGTGCAAGTTGATGACATTCTTTGATCAGTTCCATGCTGAA
AATTACGAAGGTGCCTTGGAGACGATCCGCGCTTGCGAGCTTGTACCTCTAAGCTCGGAT
GAGGTGTCGGCTCGAGTAGCTGGAGCGCGAAACGCTCGAGGCGAGCTATTACGAGCACTT
CCGGCTGTCCTACGAGCGTTATGTCATATCCTGCTTGCTATGAGGCAGAAGCTACGTACT
GCACAGCCTACCCTCAGTACACATACTGCTAATAAGCAACTAGAATGGCTGAGAGAACAG
GCTGAGGTTTTGAATACATTTGCTGGGAACATCGCGTACAGGATGCCCGGTGACACCTAC
AGCCAGCTAGCTCAGATGCAAGTCCTCATGCATTGA
Protein sequence:
MIGPSQNWLDLKRAPEQPSIADTPKKFGHSMLDNIEAAYARQVQLYNKLVFQGAKSKTAL
CQKFAQVAEEFNDPKVKEMWEIIKTMANIPALVRDEDPLKARGNPTIQQCLISQGKKYLE
RRYKQYMSDVVRANPGAAMRGGEPGTFPLVRGFVGLRLQGQNTQGLTDGVIDDRPLWPMV
YYCLRSGDANAALHCLRKAGRDHEEFIAALEEYIREPEKPLSDKLQTAINFQYRIQVRNS
TDPYKRAVYSVIRCCDVSDEHSEVARTADDYLWLKLSIIKTRPNNESESFSYSDLQKMIL
EEYGETHYHAYEKPLVYFQVLTLTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTP
RNVQAPLLSVDTDDPIPLRRLNLARLILLYVRKFELSDPSDALHYYFFLRNLKDPSGKNL
FMCCCTDLSLESRDYELLFGKMDPATGLRSTGLLDQFNNPNIDNTVIALNVAEQLVNKGL
FEDAIIVYDIAGNLEKVLELFCVLLAQVVSSGGALRERLRSLSEHVSRRLRSEELPSPHL
VDAYNKLCKLMTFFDQFHAENYEGALETIRACELVPLSSDEVSARVAGARNARGELLRAL
PAVLRALCHILLAMRQKLRTAQPTLSTHTANKQLEWLREQAEVLNTFAGNIAYRMPGDTY
SQLAQMQVLMH