New model in OGS2.0 | DPOGS202566  |
---|---|
Genomic Position | scaffold1759:- 23188-23526 |
See gene structure | |
CDS Length | 339 |
Paired RNAseq reads   | 28 |
Single RNAseq reads   | 243 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008390 (3e-51) |
Best Drosophila hit   | delilah (2e-11) |
Best Human hit | ND |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC007598 [Tribolium castaneum] (1e-10) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC007598 [Tribolium castaneum] (1e-10) |
GeneOntology terms    | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0003704 specific RNA polymerase II transcription factor activity GO:0007525 somatic muscle development GO:0007498 mesoderm development GO:0016203 muscle attachment GO:0045449 regulation of transcription |
InterPro families    | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
Orthology group | MCL18130 |
Nucleotide sequence:
ATGAGAGAGATAAATAATGCCTTCGAAGCCTTGCGAAGAGCGGTCCCAGCTTCAGAGATA
ACCGGCAATCCTGTGCCATGCGAGAAGCTCACTAAAATAACGACGTTGAGGCTCGCCATG
AGGTACATCACCGCATTATCTACCGCGCTGAGAGACACCAGTCCCGAGTCGGAGTCCGGC
TCCAGACCTGACCGCTGGCCATCTCCGCTGTGTTCGGAGCTGTCTGAGTTCTCCACAGAG
CAGGAGACTCCATCAGAGTTCGCGGAGGACTCCCTGTCGCCCTTCGACTCTTTCTTCGCG
GAATTCGACTATGAGTACATAGACAGGACATTTACGTGA
Protein sequence:
MREINNAFEALRRAVPASEITGNPVPCEKLTKITTLRLAMRYITALSTALRDTSPESESG
SRPDRWPSPLCSELSEFSTEQETPSEFAEDSLSPFDSFFAEFDYEYIDRTFT