| New model in OGS2.0 | DPOGS200046 |
|---|---|
| Genomic Position | scaffold3489:- 1212-6211 |
| See gene structure | |
| CDS Length | 525 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 119 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013906 (8e-73) |
| Best Drosophila hit | SP2353 (4e-40) |
| Best Human hit | pikachurin isoform 2 (6e-18) |
| Best NR hit (blastp) | GD11154 [Drosophila simulans] (6e-42) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000003646 [Nasonia vitripennis] (1e-42) |
| GeneOntology terms | GO:0005539 glycosaminoglycan binding GO:0005614 interstitial matrix GO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan GO:0010811 positive regulation of cell-substrate adhesion GO:0030198 extracellular matrix organization GO:0005576 extracellular region GO:0045202 synapse GO:0030054 cell junction GO:0005515 protein binding GO:0005604 basement membrane |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR001791 Laminin G domain IPR012680 Laminin G, subdomain 2 IPR013320 Concanavalin A-like lectin/glucanase, subgroup |
| Orthology group | MCL10886 |
Nucleotide sequence:
ATGAGGGTGCGGCCAGAACGCACCCGTGGAGTGTTATTGCTGACGGGTGAACACGACGAT
CTATCAGGGGATTACCTGGCGTTGATACTAAGGAATGGACATGTTGAATTAAGATTCGAT
TGTGGTAGCGGCGCAGGTGTGCTGCGGTCTCCTGAACCAGTTCATCTTGGTAGATGGAAC
ACCATATCTGTTTATCGACACAGATGGGACGCCTGGCTCAAACTGAATAATGGGAAACGA
GTGCGCGGGAGATCGAAAGGCCTCTTCTCGCGGATGACCTTCCGGGAGCCTGTGTGGGTC
GGAGGTGCTGGTAACACTACTGGTTTGCAGAACAAGCTCGGCCTCTCCGAAGGATTGCTC
GGCTGCGTCGACTTCTTGAGAATTAACGGTGACAGTTACCGTCTAGTGAAAGATGCTGTC
TCCACACTTGATATCGGTGAGTTATTTAGAAATTTTTTCGCAGACTTCCAATATATTCTT
CAGAAATCTTCGCAAATGATAATGTTTATGGAGGTTTGTGAATAA
Protein sequence:
MRVRPERTRGVLLLTGEHDDLSGDYLALILRNGHVELRFDCGSGAGVLRSPEPVHLGRWN
TISVYRHRWDAWLKLNNGKRVRGRSKGLFSRMTFREPVWVGGAGNTTGLQNKLGLSEGLL
GCVDFLRINGDSYRLVKDAVSTLDIGELFRNFFADFQYILQKSSQMIMFMEVCE