New model in OGS2.0 | DPOGS201598  |
---|---|
Genomic Position | scaffold1221:+ 182-5078 |
See gene structure | |
CDS Length | 1104 |
Paired RNAseq reads   | 4867 |
Single RNAseq reads   | 12050 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014051 (3e-80) |
Best Drosophila hit   | CG10990, isoform A (6e-96) |
Best Human hit | programmed cell death protein 4 isoform 2 (2e-68) |
Best NR hit (blastp)   | programmed cell death 4a [Glossina morsitans morsitans] (1e-111) |
Best NR hit (blastx)   | programmed cell death 4a [Glossina morsitans morsitans] (9e-107) |
GeneOntology terms    | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
InterPro families    | IPR003891 Initiation factor eIF-4 gamma, MA3 IPR016024 Armadillo-type fold |
Orthology group | MCL15926 |
Nucleotide sequence:
ATGGCGGATGTTAAAATGGGTGGTGCTGGGGGTAAGGGCGTGTGGGGTGTTCCTGGGTCC
GAGCTGTTGGAGGAGTATGTGGAGGACGCGAATGACCCCAACTACGACTCCGAGGCCGTC
AACGGTGACGTGGAGTTCAAGCAGGTCATAGTGGAGGCCGATCCTGAGGATATTGTGCGC
AAATCTGAACCGGTCATCCTGGAGTACTTCGAGCATGGTGACACTAATGCAGCTGCTGAA
GACCTGCTGGAGTTCGTCACAGCCTCCAGGAGTCACCTGGTCTGTGAAACAATCATCGAG
ATAGCACTTGACCACAAACCCTCACACTGTGAGATGGCCTCCGTACTTATATCTGATCTG
TACGGCAGGGTGTTCTCTGCTAAGGATATAGCTTACGCGTTCGAGCGTCTGCTGGAGAAG
CTCCCGGACCTGGTGCTGGACACGCCTGAAGCTGCTGTGCTGATGTCCAACTTCATAGCT
CGCTGTGTCGCCGACGACTGCCTGCCGCCGAAGTTCGTGCAATCCAAGACTGGGGCTGAT
CTTAACTCGTCAGCCAGACAAGCAATAAACAGGGCGGAGACTCTTCTGTCAATGAAGCAG
GGGCTGGTGAGGCTGGACAATATATGGGGGGTCGGAGGTGGCATCAGGCCGGTCAAATCC
CTGATTCGTCAGATCCAGCTGTTGCTGAAGGAGTATCTTACATCTGGGGACCTGGCTGAG
GCGATGCGCTGTGTCAGAGACCTGGAAGTTCCACACTTCCACCATGAGCTGGTCTATGAG
ACGGTGCTACTAGCAGTGGAAGCCATAAACTCGAGCGTAGAGGAACAGCTCTGTACCTTC
CTAGCCGAGCTGAGACGATGTGTCATCGTGACACCAGACCAGATGGACAGGGGCTTCCTT
CGTGTGCTGGAGGACATGTCGGACATAGTCCTGGACGTGCCGCTGGCCTACATCATGCTG
GACAGGTTCGTGGAGCGCTGCCAGCTGAGGTTCCGTCTGGGGGACCACGTGCTGGCCAGG
ATGCCCACCAGGGGCCGCAAGCGGTTCGTGTCTGAAGGAGATGGCGGTCTGATCAAAGAC
CACGCTCTCAAACTGAGGGAATAG
Protein sequence:
MADVKMGGAGGKGVWGVPGSELLEEYVEDANDPNYDSEAVNGDVEFKQVIVEADPEDIVR
KSEPVILEYFEHGDTNAAAEDLLEFVTASRSHLVCETIIEIALDHKPSHCEMASVLISDL
YGRVFSAKDIAYAFERLLEKLPDLVLDTPEAAVLMSNFIARCVADDCLPPKFVQSKTGAD
LNSSARQAINRAETLLSMKQGLVRLDNIWGVGGGIRPVKSLIRQIQLLLKEYLTSGDLAE
AMRCVRDLEVPHFHHELVYETVLLAVEAINSSVEEQLCTFLAELRRCVIVTPDQMDRGFL
RVLEDMSDIVLDVPLAYIMLDRFVERCQLRFRLGDHVLARMPTRGRKRFVSEGDGGLIKD
HALKLRE