DPGLEAN16245 in OGS1.0

New model in OGS2.0DPOGS201600 
Genomic Positionscaffold1221:+ 37110-41958
See gene structure
CDS Length972
Paired RNAseq reads  631
Single RNAseq reads  1534
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012212 (7e-08)
Best Drosophila hit  CG5498 (2e-15)
Best Human hitcharged multivesicular body protein 7 (5e-21)
Best NR hit (blastp)  charged multivesicular body protein, putative [Ixodes scapularis] (4e-29)
Best NR hit (blastx)  charged multivesicular body protein, putative [Ixodes scapularis] (8e-30)
GeneOntology terms


  
GO:0000815 ESCRT III complex
GO:0008565 protein transporter activity
GO:0015031 protein transport
GO:0045324 late endosome to vacuole transport
InterPro families  IPR005024 Snf7
Orthology groupMCL11466

Nucleotide sequence:

ATGGGTTTAAGTGAGTGCGGTATTCCCGAAGACAAGCTTCCACCATGCTGGTCGGATGAT
GTGCGAATGAACGCGTTATTCGCACCGTTCAGGCTGAAAGTCGCGAATCCTGAATCCTGG
GATATGAAGATGAAATTCTGGTCAGACATGGTGCGGCAGTGGTGTAGGTGTAAAACGGAC
CCGATCGTGTCTGCTGCAGATGTCAGAAGCGTGTTCCAAAGGAGAGGAAGGACCGCTGCA
TGTTTGGACATAGTCATAGAAGAGATGTATCATAATGGTGACCTGTCTCCCATATCAAAG
TATCAGCAGATACTCCACAACGGACCTGAGAGCTGGGTCCGTTGGGGAGCCCGGCTTGCC
TTCAAACCGGCTGCCATAGCCATCACTGCTGTCACATCACTGCTACCAGCAAGGCAAGCC
ACGGATAACAACGGTCTGCCAAAAGCGAGTATAGACTCCACACAGAGATTTGTTTTGGAG
AGTGCCGTCAAGGAGCAAGCTAATGAGCTGTTGAACAACTTCCCGGCTGGTTCGGAGAGA
ATTGGCACCATCGACGAGCTAATGAGATCCAGCGGTCACACTAATAGAGAGGTCTATGAA
GTTCTCCTGGGTTACTTGGTGTCCCAGGGTATGGCCGTCAAGAGTGGGGATGTCGTGAAA
ATAGCGGAACCAAACAAAAAAGTCCAGCCGGTTACGGAAATGGACACGGCGATGGTGAAA
CTGATGTCCGCGGAGACGCGGCTGTCCGACGACGTCGCGCGACTGTCGCGAGACGTGTCC
GTCGCGGAGTCTGAGGCGAGGGCCGCCATGAAGCTTGGCAACAAGATCGCTGCTAAGAAC
CACCTCAGGAGGAAGATGAGGACCCAGCAGAAGCTGCAGCAGTGTGAGGCAGCGCTTGAG
AACATCAAGGAGCTCATGTTGCAGGCTAGGAACAGTGACGTCACATCCGCCGTCGTAGAT
ACATACAGGTGA

Protein sequence:

MGLSECGIPEDKLPPCWSDDVRMNALFAPFRLKVANPESWDMKMKFWSDMVRQWCRCKTD
PIVSAADVRSVFQRRGRTAACLDIVIEEMYHNGDLSPISKYQQILHNGPESWVRWGARLA
FKPAAIAITAVTSLLPARQATDNNGLPKASIDSTQRFVLESAVKEQANELLNNFPAGSER
IGTIDELMRSSGHTNREVYEVLLGYLVSQGMAVKSGDVVKIAEPNKKVQPVTEMDTAMVK
LMSAETRLSDDVARLSRDVSVAESEARAAMKLGNKIAAKNHLRRKMRTQQKLQQCEAALE
NIKELMLQARNSDVTSAVVDTYR