| New model in OGS2.0 | DPOGS206779 |
|---|---|
| Genomic Position | scaffold1641:- 12568-15628 |
| See gene structure | |
| CDS Length | 876 |
| Paired RNAseq reads | 243 |
| Single RNAseq reads | 610 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010697 (1e-122) |
| Best Drosophila hit | Tfb4 (3e-91) |
| Best Human hit | general transcription factor IIH subunit 3 (4e-70) |
| Best NR hit (blastp) | transcription factor TFIIH-subunit, putative [Aedes aegypti] (2e-111) |
| Best NR hit (blastx) | transcription factor TFIIH-subunit, putative [Aedes aegypti] (9e-109) |
| GeneOntology terms | GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016251 general RNA polymerase II transcription factor activity GO:0005675 holo TFIIH complex GO:0006355 regulation of transcription, DNA-dependent GO:0006281 DNA repair GO:0000439 core TFIIH complex |
| InterPro families | IPR004600 Transcription factor Tfb4 |
| Orthology group | MCL15464 |
Nucleotide sequence:
ATGGCAGACGACGAAGCGCCCTCAGATAGCAGTCTCCTAGTAATAATTGTTGATACGAAC
CCCAACCAGCGGTATATCACCGAAGATCCAAAAGTTTTGACCGGTTGTTTAGACGCGGTT
ATCGCATTCGCGAACTCCCACCTTATGCAAAAATCCAGGAATCAACTAGCGGTTATTGGG
TGTCACTTTCATAAAAGTGAATATCTGTATCCATCACCTGGGAAACCCTTAGATGTGAGA
CAAATTGATGGGCAATATGAATTGTTCACACTCGTAGAAAAGACTATTAAAATGAGATTA
GTGAATTTAATAAAGAGTCAACCTCAAGAAGAACGGCCGGGTGAATCGCTGCTGGCTGGA
GCCATGGCTATGGGGTTATGTTTTATTGCTAGAATGCGTCGTGAACAGCCGCCGGGATTG
CGTATGGTGAGCAGAATGTTGGTAGTGACGGGGAGCTCGGACACAGCCGCGCAGTACATT
AACTATATGAATGTATTTTTTACTGCACAGAAACAACAAGTGTTGTTGGACGTGTGTTCG
TTGGACAAACATCTGAGCTTATTACAGCAGGGTTGCGACATCACAGGAGGCTTATATTTA
AAAGTACCCTCGCTTGAAGGACTCTTGCAATATCTATTGTGGGTTTTTCTGCCTGAGGCC
AGTGAAAGACGGGAACTGGTACTGCCCGGCCGAGGCAGAGTTGATTACAGAGCGGCCTGC
TTCTGTCACAGGGAATTATTGACTATAGGATATGTGTGCTCTGTGTGTTTGAGCGTGTTT
TGCAAGTTCAGCCCAATATGTACCACTTGCCATACCGTGTTTAAGATCGGCGGTCCTCTC
CCTATGAAGCCGAAGAAAAAGAAAATAAAGATTTAG
Protein sequence:
MADDEAPSDSSLLVIIVDTNPNQRYITEDPKVLTGCLDAVIAFANSHLMQKSRNQLAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEERPGESLLAG
AMAMGLCFIARMRREQPPGLRMVSRMLVVTGSSDTAAQYINYMNVFFTAQKQQVLLDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPEASERRELVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPLPMKPKKKKIKI