| New model in OGS2.0 | DPOGS202254 |
|---|---|
| Genomic Position | scaffold108:- 14941-22878 |
| See gene structure | |
| CDS Length | 2631 |
| Paired RNAseq reads | 1541 |
| Single RNAseq reads | 3723 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004906 (1e-96) |
| Best Drosophila hit | CG8129, isoform B (6e-91) |
| Best Human hit | serine racemase (1e-29) |
| Best NR hit (blastp) | PREDICTED: similar to CG8129-PB, isoform B [Apis mellifera] (7e-125) |
| Best NR hit (blastx) | PREDICTED: similar to CG8129 CG8129-PB [Tribolium castaneum] (3e-112) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0008152 metabolic process GO:0030170 pyridoxal phosphate binding GO:0016597 amino acid binding GO:0004794 L-threonine ammonia-lyase activity |
| InterPro families | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit |
| Orthology group | MCL10839 |
Nucleotide sequence:
ATGGCTAACACCCAAGACGTTGAATATGACGAATATTGTGATCCGAACAATCCTCGGAAG
ATTAAATATGACGATATTTTGGCTGCATATAGAAGAATTACGGGTTACGTATTGAAAACG
CCTTGTACGAGAGCTCACATGTCAGATAGGTTGGGTATGGAAATATATTTAAAGCAGGAG
TTCATGCAACACACTGGATGCTTTAAGGAACGCGGAGTTAGGAATACTATGCTGTTACTG
TCGGAGGAGCAAAGGAAAGTTGGTGTAATAAGCGCTTCGACGGGGAACCATGGCACTTCA
ATGAGTTATCACACCACACAGATGGGTATTCCTTGTATAGTTGTGATGCCGGTTCGAGCA
CCTATCACTAAACTGACTAAATGTCAAAACTTTGGAGCGAAAACAATACAACATGGCGAC
AATATGGCCGAAGCGAAACATTACGCTATGGCTCTGTCAAAAGAAAAGAAATTATACTAC
GTTAATGGTTATGATCACCCAAACGTCATAGAAGGTCAGGGTACTATCGGCATAGAGATT
ATAGAACAGGTACCGGATGTAGACGCTGTCATTGTACCTGTTGGCGGAGGTAGTCTTTTA
TGCGGCATAGCTGTTGCCGTGAAACATTTAAAACCGGACACGGAAGTTTATGGTATACAA
ACAGAAAAAGCTTATAGTATGGTAGAAGCTTTAAAGAGAAATGAAAGGGTGAAAATTGTC
ATCGACTCTACCATCGCTGACGGTCTAGGAGTAAACTTAGCAGGCGTCAATACTTTTCAC
AATCTGAAAAGCGGAATATTGGATAAAATGGTAATAGTTAAAGAGGACTGGGTCGCCCGT
GCTATAATGCATGTGGTCGAGGAAGAGCGCTACGTCATAGAGGGTGCTGCGGCTGTCACC
ATAGCGGCCGTTATGGCGGGGCTTTTCCCGAATCTTAAGGGTAAAAAGGTGGTATGCGTG
TTGTCTGGTGGTAACATCGACACAACCATCCTGGCTCGGTCGCTGGAGCGCGGTATGGCC
GCGGAGGGTAGGTTGGTGAAATTCAAGGTGACGGTGAGCGACCGTCCCGGGGGTATGGCG
GAGCTGTGCTCGCTGCTAGCCACCATCGGCGTCACCGTCCGCGACTGTATACCGGAACGA
GCCTGGGTCAAGGGAGACGTGTTCAGTGTTGAGATGAAAGTGATAGTTGAGACCAGAGGA
TGGGATCACACGAAAGAACTGATAGAGCAAATAAAGAAGAAGTACAAGGAATGTTTCTTC
CACGAGATGAGCGAACGCAGCGACAAGGGCGCCGGCGCCAAGAGAGGCCCCTGCCTCGCC
CCCAACCCGGAAGATTTCGATGAGTTCTGCGATCCTGACAATCCAAAAATAATTAAATAT
GAAGATGTCGTCGACGCTTTAAAACGTATAAGAAAATATATACCGCAGACTCCAATAATA
GCTTCACACTATCAGAAAGAATGCGGCATCAATCTTTTCTACAAACTGGAAACGGTAATG
AGAACAGGAAGTTTTAAGGAAAGAGGTGCATTAAACGCGCTAGATTTATTGCCAAGAGAT
AGACAAAAGATGGGCGTTGTTGTAGCGTCTCTTGGAAACCAGGCAATGGGAATATGTTAT
TATGGTAAAAAACTAGGGATACCAGTGACTGTGGTGATGCCAACCTCTGTGCCAGTCATA
AAACTACAAATGTGCAGCGACATGGGCGCCAAAGTTGTAGTTCAAGGTCACAATTTGGTG
GACTCTCAGAAATATGCTCGAGCCTTAGCAAAAGAGAAAGGTCTCACTCATATTAACGCT
CGTGACTATCCCGATGTGATGGCGGGCTATGGTACTGTAGCAATAGAAATTATGGAGCAA
GTGCCCGCTTTGGACGCTGTTCTATTGCCCATTGGGACCGGCGGCTTGGCGGCAGGGGTC
GCTACTGTCATCAAACACGTCAATCCAAACTGCCTTGTATACGGAGTTCAATCTGAACGA
CTGCCAACATTTTACAAGTCCCTGGAAGCGGGAGAACCTCTTACTTTGCCCTACGAACCA
TCAATAGCCGAGGGTATAGCGATGCCGTATGTCGGAGTGAATGCGTTTAGAAACGCACAA
AATTTGCTCGACAAATTAATATTAGTTTCTGAGGACTGGATAGCTAGGTCTATTTTGCAT
TTAATTGAAAAAGAACGGCTAGTTGTAGAGGGCGCTGGTGCTTGTCCGTTGGCAGCAGTT
CTATGTAGCCAGGTCCCTGAACTGAAGTCAAAAAATGTCGTTATAATCCTCAGTGGAGGT
AACATAGACGCTGTATTACTAGGCCGTTGTTTAGACAGAGGACTGGCAGCAGAAGGTCGT
CTTATAAAATTCAAAGTACTCGTGAAAGATTTAGGCACAGAGTATGAAAGGTTTACTAAA
CTGCTAGCGGATAACGGTTATAATTTGGTAAGACAGTTTCAGGATCGCATTTGGGTGGAA
AACGAAATTTACCGAGTCGAGATGAAAGCCGTCTGCGAGACGAGAGGACTCGACCACGCT
CTGGAGTTGAAGAGAATAATTGAAAAGACATATCCAAATGAATGCGCTTTTGAAACGGAA
CCCTTTGATAGCGACAACACCTGCTCTTGCTATATACCTTCAAAATGTTAA
Protein sequence:
MANTQDVEYDEYCDPNNPRKIKYDDILAAYRRITGYVLKTPCTRAHMSDRLGMEIYLKQE
FMQHTGCFKERGVRNTMLLLSEEQRKVGVISASTGNHGTSMSYHTTQMGIPCIVVMPVRA
PITKLTKCQNFGAKTIQHGDNMAEAKHYAMALSKEKKLYYVNGYDHPNVIEGQGTIGIEI
IEQVPDVDAVIVPVGGGSLLCGIAVAVKHLKPDTEVYGIQTEKAYSMVEALKRNERVKIV
IDSTIADGLGVNLAGVNTFHNLKSGILDKMVIVKEDWVARAIMHVVEEERYVIEGAAAVT
IAAVMAGLFPNLKGKKVVCVLSGGNIDTTILARSLERGMAAEGRLVKFKVTVSDRPGGMA
ELCSLLATIGVTVRDCIPERAWVKGDVFSVEMKVIVETRGWDHTKELIEQIKKKYKECFF
HEMSERSDKGAGAKRGPCLAPNPEDFDEFCDPDNPKIIKYEDVVDALKRIRKYIPQTPII
ASHYQKECGINLFYKLETVMRTGSFKERGALNALDLLPRDRQKMGVVVASLGNQAMGICY
YGKKLGIPVTVVMPTSVPVIKLQMCSDMGAKVVVQGHNLVDSQKYARALAKEKGLTHINA
RDYPDVMAGYGTVAIEIMEQVPALDAVLLPIGTGGLAAGVATVIKHVNPNCLVYGVQSER
LPTFYKSLEAGEPLTLPYEPSIAEGIAMPYVGVNAFRNAQNLLDKLILVSEDWIARSILH
LIEKERLVVEGAGACPLAAVLCSQVPELKSKNVVIILSGGNIDAVLLGRCLDRGLAAEGR
LIKFKVLVKDLGTEYERFTKLLADNGYNLVRQFQDRIWVENEIYRVEMKAVCETRGLDHA
LELKRIIEKTYPNECAFETEPFDSDNTCSCYIPSKC