| New model in OGS2.0 | DPOGS202256 |
|---|---|
| Genomic Position | scaffold108:- 1216-4644 |
| See gene structure | |
| CDS Length | 1134 |
| Paired RNAseq reads | 5316 |
| Single RNAseq reads | 14661 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004908 (2e-111) |
| Best Drosophila hit | proteasome 26S subunit subunit 4 ATPase (4e-125) |
| Best Human hit | 26S protease regulatory subunit 4 (1e-91) |
| Best NR hit (blastp) | Probable 26S protease regulatory subunit 4 [Brugia malayi] (1e-159) |
| Best NR hit (blastx) | Probable 26S protease regulatory subunit 4 [Brugia malayi] (4e-160) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0000502 proteasome complex GO:0016887 ATPase activity GO:0005838 proteasome regulatory particle GO:0008540 proteasome regulatory particle, base subcomplex GO:0006508 proteolysis GO:0004175 endopeptidase activity GO:0005737 cytoplasm GO:0030163 protein catabolic process GO:0005524 ATP binding GO:0009987 cellular process GO:0000022 mitotic spindle elongation GO:0008283 cell proliferation GO:0007052 mitotic spindle organization GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR003960 ATPase, AAA-type, conserved site IPR003959 ATPase, AAA-type, core |
| Orthology group | ND |
Nucleotide sequence:
ATGGGACAAAATCAATCTGGTGGTGGCAGCGGCGGAGACAAAAAGGATGACAAGGATAAG
AAGAAGAAATATGAACCACCGATTCCTACAAGGGTTGGAAAAAAGAAGCGCAAGGCTAAG
GGGCCAGACGCAGCTTTAAAGCTGCCTCAAGTAACGCCACATACGCGATGTAGGTTGAAA
CTACTTAAGTTGGAGAGAATTAAGGATTACTTACTTATGGAGGAGGAATTCATCCGCAAT
CAAGAAAGACTGAAGCCACAAGAAGAGAAAATTGAAGAGGAAAGATCAAAGGTAGATGAT
CTCCGTGGCACACCAATGTCAGTAGGTACTCTGGAAGAGATCATTGATGACAATCATGCC
ATAGTCTCCACATCCGTCGGCAGTGAACACTATGTCAGCATCCTGTCATTTGTTGACAAA
GACCAGCTAGAGCCAGGCTGCTCAGTTTTACTAAACCATAAGGTTCATGCTGTGGTGGGT
GTGCTGGGTGATGACACCGATCCGATGGTGTCAGTCATGAAGCTCGAGAAGGCTCCACAA
GAGACATATGCAGATATTGGTGGTCTTGACACACAGATACAGGAAATTAAGGGTGATGGT
CCGAAATTAGTTCGTGAACTATTCAGAGTAGCCGAAGAACATGCTCCATCAATTGTATTT
ATTGATGAAATAGATGCTGTCGGGACCAAACGTTATGACTCCAACTCTGGCGGTGAGAGG
GAAATTCAAAGAACTATGTTGGAGCTCCTCAATCAGTTGGACGGTTTTGATTCAAGAGGA
GATGTTAAGGTTATTATGGCAACTAACAGAATAGAGACCCTAGACCCGGCCCTGATCCGT
CCAGGCCGGATCGATCGCAAGATAGAGTTCCCGCTGCCCGACGAGAAGACCAAACGACGC
ATCTTCACCATACATACCTCCAGGATGACCTTGGCCGATGATGTCAACTTGTCAGAGCTC
ATCATGTCCAAGGATGATCTGTCCGGGGCAGATATGAAGGCTATTTGTACCGAGGCTGGT
TTGATGGCACTCAGAGAACGGCGTATGAAGGTTACTAATGAAGACTTCAAGAAGTCTAAA
GAGAGTGTCCTGTACCGCAAGAAGGAAGGCACTCCGGAAGGGCTTTACCTTTAA
Protein sequence:
MGQNQSGGGSGGDKKDDKDKKKKYEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLK
LLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGTLEEIIDDNHA
IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQ
ETYADIGGLDTQIQEIKGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER
EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR
IFTIHTSRMTLADDVNLSELIMSKDDLSGADMKAICTEAGLMALRERRMKVTNEDFKKSK
ESVLYRKKEGTPEGLYL