| New model in OGS2.0 | DPOGS202329 |
|---|---|
| Genomic Position | scaffold108:+ 32984-39793 |
| See gene structure | |
| CDS Length | 2382 |
| Paired RNAseq reads | 99 |
| Single RNAseq reads | 346 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004906 (1e-45) |
| Best Drosophila hit | CG8129, isoform B (5e-53) |
| Best Human hit | serine racemase (2e-23) |
| Best NR hit (blastp) | threonine dehydratase catabolic, putative [Phytophthora infestans T30-4] (3e-74) |
| Best NR hit (blastx) | threonine dehydratase catabolic, putative [Phytophthora infestans T30-4] (2e-73) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0008152 metabolic process GO:0030170 pyridoxal phosphate binding GO:0016597 amino acid binding GO:0004794 L-threonine ammonia-lyase activity |
| InterPro families | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit |
| Orthology group | ND |
Nucleotide sequence:
ATGGCTTGTGAAAAAACATATGAAAGTTGCAATTACTTTGGAGATATATCTGGGGCTTAT
AAGCAAAATGACTTTGACCAGGAGTCTAAGTATGTAGGGAATCATTTTTGCAATGTGCTA
CTAAAATGCGAAAACCTACAACTTACCGGCAGTTTTAAAGCACGTGGCACATTCAACGTT
GTGTCTTGTATGACGACCGCGGAAAAAGGAAAAGGTTGCACCGTCGCAGGAGGAAGAAAC
TTTTTGAACGCAATGACTTACAGTGGCTTTAAAGAGTCTGTCCCTGTAAACGTTGTTGTA
CCAAAGGATTGTTCTTTAGCAGACAAGCAGAAGTACAAAGAAAATTATGCGGTTATCAAA
GTATTTGGTAACGATTCGAACGAGTCTAGTCTCCATGCTTTGACTTATTGTGATGAAATA
GGCTCGCATTTCATTCGATGGTTGGACTTGTTAGCTGGATATGGGACATTAGGGTTGGAG
ATTCTTTCTCAGGTTGATAAGTTAGATGCTATAATATGCCCCGTCGGCACCGGAGGCCTC
ATAGCTAGCATATTGGTGGCAGTTAAATCCTTAAAACCCCAATGTTTGATTTATGGTGTT
GAAAGTTCAGGAGCACCAACTATGAGTAAAGCCTTGCAAGAGAAGAAACCAACGATAATT
CTAGTCAAACCAACAATTGCTGAAAGCATTGCCGATAAAATAGCAAGCAACAATGCTTTT
CATATCATTAAAAGATATCTAACCAAAATGATCACTGTTGATGATTTGTGGATATCAAGA
GCTATGGTTAACTTATTGGAGAGAGAAAAGATAATAGTGGAAGCGGCTGCACCTACACCA
GTCGCCGCCATAATGGCGGGAAAAGTTCCTGAACTACGAGGAAAAAATGTCGTGTGCGTG
TTGACTGGTGGTAATATAAAATTATCTCGTCTGCCTTACATCGTGGATCGCGGTCTAATG
GCTGAAGGGCGGCTCGTTGGGTTTTCGATCACTTTGCCGGATGGACCAGCTGAGATTGCC
CGTCTGCTGACTAAAGTTGTGGATACCGGTGCGGACGTGAGGAGTTTCGAACCGGAACGG
TCTTGGATTAAGCGAGACGCTCTTAATGTCACCGAAGAGACAGTGATGGAACCGGAAAGG
CCACACGTATTAACATTTAATGAAATAAAACAAGCGGCGGAGAGAATTGAAGACGGCATC
ATTCACACTCCTCTTTGTGAGGCAAAAATAAGTAAATACATGGATTATAACATTTATTTG
AAATGTGATAATTTACAATACACTGGAAGCTGCTCTGAAAGAGGTATCCGGAACGCCTTT
GTCGCTCTTAACGATGAAATGTCTGAAAGAGGAGTGATTGTACCGTCTAACGGAAACATG
GCTCTGGGAGCTGCATATCAAGGACACTTGCTAAATATACCAGTGACAGCGGTACTTCCG
GAGAGATGTCCCCCGTCACTCTCGCAGCGGTGTGCTGAACTAGGCGCTCACGTGGTTCTG
GTTGGTGAAACAGTCGAAGATGCTGTCTGTTACGCCAACAAGACCAACCGGGATGGATCA
CAGATTATATTAACTTCGGACGACCCGTTAGTAATGGCTGGCCTGGGTACTGTTGGCGTT
GAAATCATAACTCAATTGCCAGAGACAGATGCGGTTATTGTACCTGTAGCGTCAGGCGGT
CTTCTAGCTGCAACGCTTGTAGCCTGCAAGAAGCTAAAGTGCACCTGTCTCGTTTATGGA
GCAGAATGCGCCAAAGTCCCAAAAATGATGAAGGCCTTACAATCAGGATATCCGGTTTCG
GTGCCCGTTATACCCAATATAGCACAGGGTTTAAGTTCTGCGGTTGTCGGGGAGAACGCC
TTCGCGACTATAAAGGGTCGTTTGGATAGAATGTTAGTCGTCGACGAAGCCTACATTGCT
CGCGCCGTAATAAATGTATTAGAACGTGAGAGACTTGTGGCGGACGGCGCCGGCGTGTGC
GCGTTGGCTGCTGTCATGCAAGGTCTAGTTCCAGAGTTGAGAGGAAAACGAGCTGTGTGC
GTTATAAGCGGAGGCAATATCGACTCGGGACGTCTCTCCCGGACTATTCACCGCGGGCTG
GGTGTGAGTGGGAGACTTATGAGGTTTGCAGTGCCAGTCCCTGATCACTGCAAGGGACTT
GAAGTTCTAGCCGAAGCCATCGCTGATAAAAGAGCGGTCATTAAGAGCTTCGGCACCGAA
CAGATATGGGTTCACAGTGATATCGGATCTACTTGGGCAAATGTTGTAGTCGAAACGGCA
AATGAAGAAAATGCTCTAGCGCTCAAAGAACATTTGAGGAATTTGTACCCAACTGTCAAA
TTTGCAGTTTTTGATGTGGATGAAAAACATAAGATGAGATAA
Protein sequence:
MACEKTYESCNYFGDISGAYKQNDFDQESKYVGNHFCNVLLKCENLQLTGSFKARGTFNV
VSCMTTAEKGKGCTVAGGRNFLNAMTYSGFKESVPVNVVVPKDCSLADKQKYKENYAVIK
VFGNDSNESSLHALTYCDEIGSHFIRWLDLLAGYGTLGLEILSQVDKLDAIICPVGTGGL
IASILVAVKSLKPQCLIYGVESSGAPTMSKALQEKKPTIILVKPTIAESIADKIASNNAF
HIIKRYLTKMITVDDLWISRAMVNLLEREKIIVEAAAPTPVAAIMAGKVPELRGKNVVCV
LTGGNIKLSRLPYIVDRGLMAEGRLVGFSITLPDGPAEIARLLTKVVDTGADVRSFEPER
SWIKRDALNVTEETVMEPERPHVLTFNEIKQAAERIEDGIIHTPLCEAKISKYMDYNIYL
KCDNLQYTGSCSERGIRNAFVALNDEMSERGVIVPSNGNMALGAAYQGHLLNIPVTAVLP
ERCPPSLSQRCAELGAHVVLVGETVEDAVCYANKTNRDGSQIILTSDDPLVMAGLGTVGV
EIITQLPETDAVIVPVASGGLLAATLVACKKLKCTCLVYGAECAKVPKMMKALQSGYPVS
VPVIPNIAQGLSSAVVGENAFATIKGRLDRMLVVDEAYIARAVINVLERERLVADGAGVC
ALAAVMQGLVPELRGKRAVCVISGGNIDSGRLSRTIHRGLGVSGRLMRFAVPVPDHCKGL
EVLAEAIADKRAVIKSFGTEQIWVHSDIGSTWANVVVETANEENALALKEHLRNLYPTVK
FAVFDVDEKHKMR