| New model in OGS2.0 | DPOGS215840 |
|---|---|
| Genomic Position | scaffold1829:+ 17927-20031 |
| See gene structure | |
| CDS Length | 1200 |
| Paired RNAseq reads | 22430 |
| Single RNAseq reads | 61009 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013567 (0.0) |
| Best Drosophila hit | ribosomal protein L3, isoform B (4e-176) |
| Best Human hit | 60S ribosomal protein L3 isoform a (5e-156) |
| Best NR hit (blastp) | ribosomal protein L3 [Spodoptera frugiperda] (0.0) |
| Best NR hit (blastx) | ribosomal protein L3 [Spodoptera frugiperda] (0.0) |
| GeneOntology terms | GO:0022625 cytosolic large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0022626 cytosolic ribosome GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
| InterPro families | IPR019926 Ribosomal protein L3, conserved site IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR000597 Ribosomal protein L3 |
| Orthology group | MCL11604 |
Nucleotide sequence:
ATGGGATTCTATCCCAAGAAAAGGTCCCGCCGTCATCGTGGTAAGGTTAAGGCCTTCCCC
AAGGATGATGCCAGCAAGCCGGTACATCTTACAGCCTTCATTGGTTATAAGGCTGGTATG
ACCCACGTGGTCCGTGAACCCGACCGTCCTGGTTCAAAGATTAACAAGAAGGAGATTGTG
GAGGCTGTGACAATCATTGAAACTCCTCCGATGGTCTGTGTTGGTGTTGTCGGTTACATC
GAGACTCCACATGGTCTCCGCGCTCTCCTGACGGTTTGGGCTGAACATATGTCCGAGGAC
TGCCGTCGTCGCTTCTACAAGAACTGGTATAAGTGTAAGAAGAAGGCCTTCACCAAGTCC
AGCAAGAAATGGCAGGATGAGCTTGGACGTAAATCCATTGAGAAGGACTTCAAGAAAATG
ATCCGTTACTGTAGTGTAATCAGAGTTATTGCACACACTCAAATGAAGCTGTTGAAGCAG
CGTCAAAAGAAGGCCCATATCATGGAAATCCAAGTTAACGGTGGGTCTATTGAAGACAAA
GTTAATTGGGCCAGAGAACATTTGGAGAAGCCTATTCCAATTGACTCTGTTTTTGCTCAG
GATGAGATGATTGACTGCATCGGTGTGACTAAAGGAAAGGGATACAAAGGTGTCACCTCC
CGTTGGCACACAAAGAAGTTGCCGCGTAAGACCCACAAGGGTCTGCGTAAGGTCGCTTGT
ATTGGAGCGTGGCATCCTTCAAGAGTTTCATTCACTGTGGCTCGTGCTGGTCAAAAGGGC
TATCACCACCGCACTGAAATGAACAAGAAGATCTACAGAATTGGACAAGGTATTCACACC
AAGGATGGAAAGGTCATTAAAAACAATGCATCCACTGAATATGACTTGTCAGAGAAGTCT
ATCACACCCATGGGTGGTTTCCCTCACTATGGAGAAGTTAACAATGACTTCATCATGATC
AAGGGTTGCTGCATGGGTCCCAAGAAGCGCGTTATCACCTTAAGAAAATCACTCCGCGTC
CACACGAAGAGGGCAGCTCTTGAGAAGATCAACCTCAAGTTCATTGACACCGCGTCTAAG
TTTGGTCACGGTCGCTTCCAGACGCCGGCTGACAAGGCCGCGTTCATGGGCACGCTCAAG
AAGGATCGCGTCCGCGAAGACGCCGCCAATGCAGCTGCACCGGCTGCAGCTCAGTCTTAG
Protein sequence:
MGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV
EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKS
SKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGSIEDK
VNWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVAC
IGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDLSEKS
ITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINLKFIDTASK
FGHGRFQTPADKAAFMGTLKKDRVREDAANAAAPAAAQS