Genomic Position | scaffold7551:+ 1212-1559 |
---|---|
See gene structure | |
CDS Length | 348 |
Paired RNAseq reads   | 1 |
Single RNAseq reads   | 1 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008012 (3e-07) |
Best Drosophila hit   | ND |
Best Human hit | jerky protein homolog-like (3e-15) |
Best NR hit (blastp)   | PREDICTED: similar to jerky homolog-like [Acyrthosiphon pisum] (2e-26) |
Best NR hit (blastx)   | PREDICTED: similar to jerky homolog-like [Acyrthosiphon pisum] (2e-22) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process GO:0005634 nucleus GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0000775 chromosome, centromeric region GO:0003676 nucleic acid binding |
InterPro families    | IPR006600 Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain IPR012287 Homeodomain-related IPR004875 DDE superfamily endonuclease, CENP-B-like IPR004906 Pogo transposase / Cenp-B / PDC2, subgroup, DNA-binding HTH domain |
Orthology group | ND |
Nucleotide sequence:
ATGAAAAAACTAGGAGGGACGTCTAATTTTCAAGCAAGCACAGGCTGGTTAAAACTATTT
AAGTCAAGATATGGCATTCGTGAACTTCAAATACAAGGAGAAAAACTATCTGCTGATTCA
TCAGCAGCTGAATCATTCAAAATCAAACTATGGCATATACTCAACCAAGAAAATTTCGCT
CTGGAAAACGTTTACAATGCAGACGGAACCGGGCTTAATTGGAAAGCATTGCCGCGAAAA
ACTCATGCCTCACGTCGTGAATTAGCAGGACCTGGTCCTAAAATACGCAAGGATCGTATC
ACTGCTTTAGCATGCGCTAATGCTACAGCAGCTACTAGCAGTCTCTGA
Protein sequence:
MKKLGGTSNFQASTGWLKLFKSRYGIRELQIQGEKLSADSSAAESFKIKLWHILNQENFA
LENVYNADGTGLNWKALPRKTHASRRELAGPGPKIRKDRITALACANATAATSSL