| New model in OGS2.0 | DPOGS201100 |
|---|---|
| Genomic Position | scaffold4795:+ 650-7282 |
| See gene structure | |
| CDS Length | 2064 |
| Paired RNAseq reads | 938 |
| Single RNAseq reads | 2980 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013649 (4e-146) |
| Best Drosophila hit | stambha A, isoform A (4e-145) |
| Best Human hit | protein EFR3 homolog A (3e-95) |
| Best NR hit (blastp) | PREDICTED: similar to conserved membrane protein at 44E CG8739-PA, isoform A [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to conserved membrane protein at 44E CG8739-PA, isoform A [Apis mellifera] (2e-175) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005488 binding GO:0000910 cytokinesis GO:0000299 integral to membrane of membrane fraction GO:0007602 phototransduction GO:0007268 synaptic transmission GO:0016079 synaptic vesicle exocytosis GO:0048488 synaptic vesicle endocytosis GO:0045202 synapse GO:0030100 regulation of endocytosis |
| InterPro families | ND |
| Orthology group | MCL11719 |
Nucleotide sequence:
ATGCCCAGAAAGACATATATTATAGAAATAATATGTGTTTTCTTGGAGGTCAAAAAAACC
CAAGAACAATTTCTCACCATCAGTGTTTGTGTTCAGTTCGTCAGATTCGCGAACATAGAG
GAGGATACTCCGTCGTATCATCGCAGATACGACTTCTTCGTGTCCAAGTTCTCCGCCATG
TGTCACAGTAACCACAACGACCAGGCGGTCAGAGACAACATCCGGCTCGCTGGGATACAG
GGGCTCCAGGTTCACCGTGCTGGTGCCGGGTTCATCGCGTTGCAGAGAGAGGAGCATCAA
CTGTGCCTGGGACTTGCGACCCAGGGCGTGATAAGGAAGACAGTGTCCGACGACCTCGTG
GAGAACATCTGGGAGGCCCAGCACATGGACAAGATCGTACCCTCGCTGCTCTATAACATG
CAGACAGCCGAGAAATACGAAACGGTCACCTGTATGGAGACGGACGCGAGGGACGGCTTG
GAGGACGACCCGCCACGCCTCGCCGAGGCCTGTCTCAGGGAGCTGGTGGGCCGCGCCTCC
TTCGGACACATACGGAGCGTGCTCAGACCCGTGCTCACTCATTTCGATCGTCACGAACTG
TGGGTGCCGAACGACTTCGCCGTCCACACATTCAAAATCATCATGTTCTCAATTCAAGCC
CAGTACTCGTATAGTGCTGTAGAGGCTCTGATGCAGCACTTGGACGCGGGGACCTGCGGA
GACCCGGCCGCCAGGACCCGGGTCAGAGCCGCGAGGGCCGCGGTCCTTAGTAACATAGTC
GCCATAGCAGCTGGAGATAGTGTTGGTCCATCAGTTTTGGAGATCATCAACAACCTCCTG
ACCAACCTGAGAACGTCTGTGGCGAGAGATTCAGAGAAGGAGTCGGACGAGAGGTTGTAC
CAGGAGGCTCTCATCAACGCGCTGGGGGAGTTCGCGGACCACCTGCCCGACTACCAGAAG
ATAGACATCATGATGTTCATAGTGAGCAAGATACCCACCACGCGCGGCAAGCCCGCCCGC
GCCGACGTCATGCTGCAGAGCATCCTGCTCAAGTCCCTGCTCAAGGTGGGCACGACGTAC
AAGACGAGCGAGCTCAGCAAGGCCTTCCCCGCCGCCTTCCTGGAGGCGCTGCTGCGGCTG
TCCGCGGCCGCCGGAGACTCGCCGCCGCCCGTCCTCTTGCAGCGGATACTGCACACGCTG
CTCGACAGGAGGGGCAACGCGCACCTGCTCGCCGAGCCCACGGTGGAGTACGAGGCGCTG
GGCCTGTCGGTGGGCAAGTGCTCGCGGCCCGACCTCATATTCATCAGCAAACACGGCTAC
GCCATATTTAACTCGCTGTACGAAGGGTTACAGCTGGAGTCCAACAACCTGGAGAACATC
AGCGCCATCTACACCACGCTGGCGCTGCTGTTTGTGGAGCTGGCCTCGGACGAGACGGTG
TGCGACATGCTGCAGCTCGTGCTGTCGTATGTATCACCAACAACAATCGCGACACTGGAC
GGGCCTATCCAGCAGTCCGCGCTGTCCAACCCGGTGCTGTCCGTGTGGCAGCAATGTTCG
CTGCACGTCGTGTGCGCGTCCCTGGCGGCGCTGGTGTGTCACGTGATGATGCTGCCCGCC
CTGCAGCACTACATCACTCAGATCGTCGACGCTCGCCGCGAGGAGGCGCCGCATCTGTTA
CCGCCGCTGAAGCAATACGACCAGCTGCCTCCCTCCAAGATGCCCAGCAAACTGCCCTAC
CTCATGATAGACCAGATGGCGTTGTCGGAGTGTTTGTCATCGTGCGGGGTGGAGGGTAGT
CGACTGTCGAGTGGTGCTCGGTACGGCCCAGCTGTACACAGGCACTCCTGGGTCGAAGCT
GGAGCTGCCCAGGGTAGAGACAGCTTGGCAGACATCTCAGCCGGGCCCACCACGGATCTG
GACAGCGCTAACAGCTCTCCAGGTGTACAGAGGAGAATTCAGTACGACGATCTGGACGAG
GAGTACAGACAGTTCATAGAGAAATATAACCACAACCACCGACCCACCGCACACGACTTC
GGAACATACGTAACATACTACTAA
Protein sequence:
MPRKTYIIEIICVFLEVKKTQEQFLTISVCVQFVRFANIEEDTPSYHRRYDFFVSKFSAM
CHSNHNDQAVRDNIRLAGIQGLQVHRAGAGFIALQREEHQLCLGLATQGVIRKTVSDDLV
ENIWEAQHMDKIVPSLLYNMQTAEKYETVTCMETDARDGLEDDPPRLAEACLRELVGRAS
FGHIRSVLRPVLTHFDRHELWVPNDFAVHTFKIIMFSIQAQYSYSAVEALMQHLDAGTCG
DPAARTRVRAARAAVLSNIVAIAAGDSVGPSVLEIINNLLTNLRTSVARDSEKESDERLY
QEALINALGEFADHLPDYQKIDIMMFIVSKIPTTRGKPARADVMLQSILLKSLLKVGTTY
KTSELSKAFPAAFLEALLRLSAAAGDSPPPVLLQRILHTLLDRRGNAHLLAEPTVEYEAL
GLSVGKCSRPDLIFISKHGYAIFNSLYEGLQLESNNLENISAIYTTLALLFVELASDETV
CDMLQLVLSYVSPTTIATLDGPIQQSALSNPVLSVWQQCSLHVVCASLAALVCHVMMLPA
LQHYITQIVDARREEAPHLLPPLKQYDQLPPSKMPSKLPYLMIDQMALSECLSSCGVEGS
RLSSGARYGPAVHRHSWVEAGAAQGRDSLADISAGPTTDLDSANSSPGVQRRIQYDDLDE
EYRQFIEKYNHNHRPTAHDFGTYVTYY