New model in OGS2.0 | DPOGS214341  |
---|---|
Genomic Position | scaffold29:- 1510-4323 |
See gene structure | |
CDS Length | 2724 |
Paired RNAseq reads   | 371 |
Single RNAseq reads   | 994 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006467 (8e-07) |
Best Drosophila hit   | CG7896 (1e-29) |
Best Human hit | insulin-like growth factor-binding protein complex acid labile subunit isoform 2 precursor (4e-24) |
Best NR hit (blastp)   | tartan/capricious-like protein [Tribolium castaneum] (6e-43) |
Best NR hit (blastx)   | PREDICTED: similar to CG7896 CG7896-PA [Acyrthosiphon pisum] (5e-59) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
Orthology group | MCL25419 |
Nucleotide sequence:
ATGAATTTATATATAATAATATTAATTTTTTTCATCGGGCAACACCATGGAGTGGATTCT
ACTAACCAGTGTTCTATAACGGATGAAATCAGAAACTGCCAATATACAGTTGTGTGTGAA
ATCTATGCCGGGAGTGCACCAAACCAAAATTGTGAAGGCGAGTCGTATGTGAAATTCATC
ATTAAAAAATCCAATGCCGTTGCTCTTAATGCCGCATTCTTCGGAGCGACAAATTTCGAT
GCCCGAGTTAGAGAAATAACAGCCATAGACAATTCGTGGAATACGATAACCGATAACACT
TTTAGATATTATTCTAAAACAATACACCTGAATCTATCTCAAAATAAAATAGTGAACGTA
AAAAGTATGGTATTCAAGAACTTAGCTACACTGAAGTCACTTAATTTATCAAGAAACGCA
ATAGAGGAATTGGAAGCATATTCTCTCAGTGTACATGAAAGTAGAGATTCACTCATTCAA
ATAATCGATCTGTCCTATAACAAGATCAAATCATTACCATCGAAAGTATTTCAAGGCCAC
CCATTATTAAACGAATTGCGCCTAGATCATAACAACATTCAGATTTTGTCCGATGATATA
TTTAACAATTTAATAAAAATGACAACATTAAATTTGAGTCACAATCAAATCTTATCATTG
AACATGACATTAATTAATTTAAAAGGACTGGAAAATTTGGACTTGTCATTCAATAAGTTA
ACTAAGGTTTCAGGATATGAGTTGAATAGATTAACTTCATTGGTTTCCGTAAATCTATCT
CATAATGCCATAGTAAATATTGAATCGAACTGTTTCAATCAGATCTTTAATTTAGAGGTT
GTCGATATAAGTAACAATAAAATTAATTCAGTTCTGGAAAATCTAATGTTCGTCAATAAT
ATAAAGTTAAGATACTTCGATATGGGACAGAATAATATGACAGGAATACAAAATGATTCG
TTTAAACACAATATTATCGATTATATTAACTTGGAAAAAAACAATATATCAGGTGAAATG
ACTGGATCGACTTTTGTCGGACTGAAAAGAATAAAGTCGTTGAATGTTACTTATCAAAAA
ATAGAGGTAATCAGGAAAGGGGCTTTTGTAGATACTGAGTCTTTAATGTTTTTAAATTTA
AGTTCGAATAATATTAATTTAGTAGAAAATTCTAGTTTTTCCCAATTACCTAACATGACC
ATATTGGATTTGTCGCATAACAAAATATCACAGATGGATTTTTTTAAGGATTCGCTAGTA
AATCTGTCTGAAGTTTATTTAAATAATAACTTACTGTCTATTTTATACACGGACACGTTT
ATAAATCAAACTAATATTAAAAAGTTAGATATTTCATACAATCTGATAGTAACAATTGAA
AGAAATTCTTTGCCCCTTCTTAATTTACAATATTTGTACGTGACCGGAAACTCCTTAGCT
GGAGTAATCAGCCCTGATATATTCTCTCCAGCCAGATATTTAAGGTTTTTAGATTTAAGT
TGCTTTAATATAAGTAAAATAGAAAATTTGTCTTTCATAAACATGCCTGTAATAACGAGA
ATGAATTTGTCTAATAATATCATAGAAGAAATAGGACCAAACAGTTTTAATAATGTAAGT
AATATGTATTCTTTGGATGTTTCACACAATCGTCTAAAAAATCTTCAAATCGACGATAGT
TTAGATCATTTAAAGGCAGTGTATTTAAACAATAACCGCTTGCAACACCTTCCCTCAGCT
CTTTTATCTAACATGTTATATGTTGATCTTTCGCACAATAATATATCAAATGTTAATAAC
GTTTTTCTTCGCTTTGCACGGAATCTCAAAGTACTACGTATTTCCAATAATATAATTAAA
AATTTCAATAACGATTTCACAAATTCACTAACTCAACTCTCCGATCTAAATTTATCATAC
AATCATATTGCTTATATAAATTTGAGTTACTATAAAGAACTCAATAATCTAGACATTAGT
TCGAATCAAATTAAATACATAAATAGTACATTTTTGAAGAATTTAGATTATTTGCAATCT
TTGGACATAAGCAATAATAATATTACCCAGCTACCACCGGGAACTTTCCAAAATATGAAA
ATTTTGAAATTTTTGAACTTGTCTTCAAATCATATAGCAAAATTGAGATTTGGGAGCGTT
AAAGGCTTACACAAAACAGAAGTGTTGGATATATCGAAGAACGAACTCACTGAAATGGAT
GTTGACGTTCTCCATGAATGCTTGGAACTCAAGAAAATATTAATAGATTTTAATCATATA
AAAGAATTTGATATCGAGAAATTGACACACGTCACTCCAAACATCCGTTCCGTCAGTTTG
GGAGGTAATCCAATTTTATGTAAGGAAATCGTACGAAATATAAGAATGGTCAACAGAACT
TTTAAACCAGTTGAAGTGACATCAATCAAAAAGATTTATCACGAGGATAATGTACACGGA
ATAAAATGCGGTGATTCGAGCCACAACGACACTATTGATAATAATCCACCAAAAGGATAC
GAGACTAATGCAAATAATACTGGGGCTATGATAGCTTTAGAATGCATTATTTTATTCGTT
ATGGTTGTAATACTTGTTTTTGCGACAGTGGTTTTGTATAAGAGATATTTTAGAACAAAC
TTTTTTAGCGATCGATCAAACCTATCTTTAAGGAGATCGTTTAATTTGAACGGTTCGGAT
TTTCAAAGTGACTTATTGAATTAA
Protein sequence:
MNLYIIILIFFIGQHHGVDSTNQCSITDEIRNCQYTVVCEIYAGSAPNQNCEGESYVKFI
IKKSNAVALNAAFFGATNFDARVREITAIDNSWNTITDNTFRYYSKTIHLNLSQNKIVNV
KSMVFKNLATLKSLNLSRNAIEELEAYSLSVHESRDSLIQIIDLSYNKIKSLPSKVFQGH
PLLNELRLDHNNIQILSDDIFNNLIKMTTLNLSHNQILSLNMTLINLKGLENLDLSFNKL
TKVSGYELNRLTSLVSVNLSHNAIVNIESNCFNQIFNLEVVDISNNKINSVLENLMFVNN
IKLRYFDMGQNNMTGIQNDSFKHNIIDYINLEKNNISGEMTGSTFVGLKRIKSLNVTYQK
IEVIRKGAFVDTESLMFLNLSSNNINLVENSSFSQLPNMTILDLSHNKISQMDFFKDSLV
NLSEVYLNNNLLSILYTDTFINQTNIKKLDISYNLIVTIERNSLPLLNLQYLYVTGNSLA
GVISPDIFSPARYLRFLDLSCFNISKIENLSFINMPVITRMNLSNNIIEEIGPNSFNNVS
NMYSLDVSHNRLKNLQIDDSLDHLKAVYLNNNRLQHLPSALLSNMLYVDLSHNNISNVNN
VFLRFARNLKVLRISNNIIKNFNNDFTNSLTQLSDLNLSYNHIAYINLSYYKELNNLDIS
SNQIKYINSTFLKNLDYLQSLDISNNNITQLPPGTFQNMKILKFLNLSSNHIAKLRFGSV
KGLHKTEVLDISKNELTEMDVDVLHECLELKKILIDFNHIKEFDIEKLTHVTPNIRSVSL
GGNPILCKEIVRNIRMVNRTFKPVEVTSIKKIYHEDNVHGIKCGDSSHNDTIDNNPPKGY
ETNANNTGAMIALECIILFVMVVILVFATVVLYKRYFRTNFFSDRSNLSLRRSFNLNGSD
FQSDLLN