| New model in OGS2.0 | DPOGS214346 |
|---|---|
| Genomic Position | scaffold29:+ 114282-161293 |
| See gene structure | |
| CDS Length | 1002 |
| Paired RNAseq reads | 313 |
| Single RNAseq reads | 1170 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003968 (5e-54) |
| Best Drosophila hit | wunen, isoform B (1e-71) |
| Best Human hit | lipid phosphate phosphohydrolase 3 (1e-52) |
| Best NR hit (blastp) | PREDICTED: similar to phosphatidate phosphatase [Nasonia vitripennis] (4e-83) |
| Best NR hit (blastx) | PREDICTED: similar to phosphatidate phosphatase [Nasonia vitripennis] (3e-81) |
| GeneOntology terms | GO:0008354 germ cell migration GO:0005886 plasma membrane GO:0007280 pole cell migration GO:0008195 phosphatidate phosphatase activity GO:0016311 dephosphorylation GO:0016021 integral to membrane GO:0035233 germ cell repulsion GO:0035234 germ cell programmed cell death GO:0016791 phosphatase activity GO:0016020 membrane GO:0042803 protein homodimerization activity GO:0009880 embryonic pattern specification |
| InterPro families | IPR016118 Phosphatidic acid phosphatase/chloroperoxidase, N-terminal IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase |
| Orthology group | MCL12031 |
Nucleotide sequence:
ATGGAACGAAATGAACGTAAAGCGAACTCTCGAAATCATTCAATCACTATAGATCGTGAT
TCGAAGTTTATCTTGCGAAAAGTGTTATTGGATTTCGCGATATTATTTGTCGGTCATAGC
AGTGCAACGAACGCAGGATGTGAACGGTGGGTGGAACCGCCAAACAAAGTGGCAGGTAAT
TGCGGTGCTGTCAAAACATCCGAGTCCTTCGGTTTTTTGATCCTGGTGTTCTACTTGTGG
GGTACACCGTACGAAAGAGGCTTCTTCTGTGACGATGAATCGTTAAAGCATCCATACAAG
GATTCGACTGTCACGAATCTGATGCTGTACATCATTGGGATCGGCCTGCCAGTTTTATCG
ATGTGTCTCACGGAATGGATCAGACTCCGTGACTACAAGGGCGGCCGGTCTAGGATGATC
CTGGGTAAGGAAGTTCCCGCCTGGTTGTGGGAGGCCTACAGAGTGGTCGGAGTGTTCCTG
TTCGGATGTGCCTGCCAACAACTCACCACAGACATCGCCAAGTACACCATCGGAAGACTT
AGACCGCATTTCTTCGACGTTTGCAATCCAGACATCGACTGCTCGTTGCAGGCGAACAAG
TGGCGTTACATCGAGAAGTTCACGTGCCTTGGGACCGACACCAAGCTGATGAAGGAGATG
AGGTTGTCCTTCCCCAGCGGTCACTCTTCCTTCTCAGCATACACGATGCTGTATTTTGCG
ATGTACCTCCAAAAGAGATTCACTTGGCGCGGCTCGAAGCTGTTGCGACACGGGATTCAG
TTTCTGCTGGTGATGATGGCTTGGTACACGGTCATGTCGCGCGTATCCGACTACAAACAT
CACTGGAGCGATGTTTTGGCCGGCTTCAGTATTGGACTTCTGTTCGCTATTATTGTGTTC
ACGTTCGTATCTGATCTGCGTAAGACTCCTCGCCGTCAGACATCCAATCATCACGACAAC
GAGCTCGCCACAAACGGAAACACACGCCCGTGGAACGTCTGA
Protein sequence:
MERNERKANSRNHSITIDRDSKFILRKVLLDFAILFVGHSSATNAGCERWVEPPNKVAGN
CGAVKTSESFGFLILVFYLWGTPYERGFFCDDESLKHPYKDSTVTNLMLYIIGIGLPVLS
MCLTEWIRLRDYKGGRSRMILGKEVPAWLWEAYRVVGVFLFGCACQQLTTDIAKYTIGRL
RPHFFDVCNPDIDCSLQANKWRYIEKFTCLGTDTKLMKEMRLSFPSGHSSFSAYTMLYFA
MYLQKRFTWRGSKLLRHGIQFLLVMMAWYTVMSRVSDYKHHWSDVLAGFSIGLLFAIIVF
TFVSDLRKTPRRQTSNHHDNELATNGNTRPWNV