| New model in OGS2.0 | DPOGS214349 |
|---|---|
| Genomic Position | scaffold29:+ 179386-183330 |
| See gene structure | |
| CDS Length | 855 |
| Paired RNAseq reads | 1740 |
| Single RNAseq reads | 4804 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003969 (2e-35) |
| Best Drosophila hit | wunen, isoform B (6e-45) |
| Best Human hit | lipid phosphate phosphohydrolase 3 (3e-35) |
| Best NR hit (blastp) | type 2 phosphatidic acid phosphatase [Corcyra cephalonica] (3e-66) |
| Best NR hit (blastx) | type 2 phosphatidic acid phosphatase [Corcyra cephalonica] (5e-66) |
| GeneOntology terms | GO:0008354 germ cell migration GO:0005886 plasma membrane GO:0007280 pole cell migration GO:0008195 phosphatidate phosphatase activity GO:0016311 dephosphorylation GO:0016021 integral to membrane GO:0035233 germ cell repulsion GO:0035234 germ cell programmed cell death GO:0016791 phosphatase activity GO:0016020 membrane GO:0042803 protein homodimerization activity GO:0009880 embryonic pattern specification |
| InterPro families | IPR016118 Phosphatidic acid phosphatase/chloroperoxidase, N-terminal IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase |
| Orthology group | ND |
Nucleotide sequence:
ATGGCGCGGCAAGGCAGAGACATGTTTAGAAAGCTAGTTGTAGACGTATTTCTCATCAGC
GCGTTGGGACTATCCATATATTTGTTGAATTCTTTGGTGGTGCCATTTCGAAGAGGCTTT
TTCTGTGACGACGAGAGCCTAATGTTCCCTTATAAGAACGACACTGTCAGCACTCCGGCG
TTGAGAATTTACGGTTTAGCTCTACCAATATTGGCCTTCCTGGTATGCGAATGGGTGCTG
TTCAGAGGGGAGAATGAAAAAGTGAAACTCCTCTCGTTCAGTGTTCCAGCTTGGCTGAGA
GGCTTCTATTGTCCACTAGCATCATTTTCATTTGGAGCCTGTTTCATTGAGCTCACAACG
AATATCGCAAAAGTCGTAATTGGAAGACCACGGCCACACTTCTTTGATCTCTGCAAACCG
TCAATAGACTGTAGTGCTCCTGAGTGGCAACGGAGGTACATCGAATCTCACGAGTACTCC
TGCACAGGAGACAGGACCGAGCATATGGGAGACATGCACATGTCTTTCCTCAGTGGACAT
TCGGCTTGGTCTGCTTTCACCATGTTCTATTTGGCTTTGTACCTCGAAAAGCGTGTTGTA
TGGCGCGGGACTCGCGTCTTACGTCACTCCCTTCAATTCGTCGCTGTGATGCTGAGTTGG
TTCACGGCCCTATCTCGTGTGTCTGACTACAAACATCACTGGAGCGACGTACTCGCTGGC
TATTTCATGGGCATGACCTTCGCTGTACTAGTTTGGACATGGGGTACGGACATTTTGGAA
CCAAGACAAAAACACAGGCCAGTGCCGAGCGAACTAGCTTCAATACAACACCAACAGATG
GCGCTGCCTGCTTGA
Protein sequence:
MARQGRDMFRKLVVDVFLISALGLSIYLLNSLVVPFRRGFFCDDESLMFPYKNDTVSTPA
LRIYGLALPILAFLVCEWVLFRGENEKVKLLSFSVPAWLRGFYCPLASFSFGACFIELTT
NIAKVVIGRPRPHFFDLCKPSIDCSAPEWQRRYIESHEYSCTGDRTEHMGDMHMSFLSGH
SAWSAFTMFYLALYLEKRVVWRGTRVLRHSLQFVAVMLSWFTALSRVSDYKHHWSDVLAG
YFMGMTFAVLVWTWGTDILEPRQKHRPVPSELASIQHQQMALPA