New model in OGS2.0 | DPOGS214075  |
---|---|
Genomic Position | scaffold106:+ 117075-132142 |
See gene structure | |
CDS Length | 1521 |
Paired RNAseq reads   | 1728 |
Single RNAseq reads   | 7212 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010573 (0.0) |
Best Drosophila hit   | chitin deacetylase-like 4 (0.0) |
Best Human hit | ND |
Best NR hit (blastp)   | chitin deacetylase 4 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | chitin deacetylase 4 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005576 extracellular region GO:0006030 chitin metabolic process GO:0008061 chitin binding |
InterPro families    | IPR002557 Chitin binding domain IPR002509 Polysaccharide deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel |
Orthology group | MCL15237 |
Nucleotide sequence:
ATGATTATTGAATTGTTTGCGAAGTCTAAGTCCGGAGAAAGCCGTGCAGACGAGTTGATA
GACAGTGACTTTGGTGGTGGAAGACTAGAGTCTCTCAGACCGACAGCTTGTTCTTGGCAG
TGCGTGCGCGGTGGTGAAGGGCCATTAAATTGTCAGAAAGAAGAAGAGGAATTCATTTGT
CCCGGAGGTACTCAAGGCAACGGCAATTTTGCTGATCCGGCCACTTGCCGCCGCTTCTAC
CAATGCGTCGACGGTTTCCCTTATTTGAACAGATGTCCTTCAGGTCTTTACTTTGACGAT
ATAAGCAAATTTTGCACTTTCAAAGCGGAAGCCAGATGTGGACCAATACCAACAACCGTA
GCTCCTGTGACTGAAATCCCTCAGGACATAGTTACGAATTGCGACCCATCAGAATGTCAG
CTGCCATATTGTTTCTGCTCCAAAGACGGCACACTCATCCCGGGTGGGCTAACGCCTCAG
ATGATAATGCTCACGTTTGACGGCGCCGTCAATTTGAATAACTTCGACTTATACAAGAAA
GTTTTTAATGGGAAATTACGTAATCCAAACGGCTGTCCGATTCGGGGCACTTTCTTCTTA
TCTCACGAGTACAGCAACTACGTCATGGTTCAGAGCCTCGCACACGATGGTCACGAGATC
GCTACAGGCACAATATCACAGCAGCAAGGATTACAAGACAAAGGCTACGAAGAATGGGCT
GGTGAGATAATTGGGATGCGGGAAATTCTTAACAAGTTCGCTAACATTTCACGCAGCGAA
GTTGTAGGGACGCGTGCACCATTCCTCAAACCTGGAAGAAATACACAGTTCAAGGTGCTA
GAAGATTTCGGCTACATATACGACAGTTCTATCGGAGTGCCGCCCCTTCCTCAACCCGTG
TGGCCCTACACCCTCGACTACAAGATTCCACACGAGTGCAAATCCGGAACCTGCCCTACT
AAGGCCTTCCCCGGTCTTTGGGAAGTTCCTTTTAATGCTCACTACGTCGAATCTTACGAA
GGTGGTCATTGCCCTTACTTGGATCAATGTGTTCTTCACAATCATGATGCTGACGATGTA
CTAGAATGGCTTCAGGAAGACTTCACCAGACATTACGAACAAAACCGGGCACCATACATG
ATGCCGTTCCATACCAATTGGTTCCAGATCAAGCCACTGGAGCGAGGTCTCCATAAATTC
TTAAACTGGGCTGCTAACTTAGACGACGTTTGGTTCGTAACAATGACACAGTCCCTGACG
TGGATGACGGACCCTCGCTCCGTGAAATCCTTGAACAACTACGAGCCCTGGAAGTGCGAT
AAGAAGGAGGGGCCCAAACCCTGTAACCTTTCAAACAAGTGCGCGCTGCCGTTCAAACTG
CCAGAGACTAATTTCACAGATACCAGATATATGGAAACATGTGTCGACTGTCCTAAGCAA
TACCCATGGCTCGGTGATTCTGGCGGTACGGGTATCGCTGGAACTGATAATTACATCCCT
GAAAGTCTTAGCAGAAAGTAA
Protein sequence:
MIIELFAKSKSGESRADELIDSDFGGGRLESLRPTACSWQCVRGGEGPLNCQKEEEEFIC
PGGTQGNGNFADPATCRRFYQCVDGFPYLNRCPSGLYFDDISKFCTFKAEARCGPIPTTV
APVTEIPQDIVTNCDPSECQLPYCFCSKDGTLIPGGLTPQMIMLTFDGAVNLNNFDLYKK
VFNGKLRNPNGCPIRGTFFLSHEYSNYVMVQSLAHDGHEIATGTISQQQGLQDKGYEEWA
GEIIGMREILNKFANISRSEVVGTRAPFLKPGRNTQFKVLEDFGYIYDSSIGVPPLPQPV
WPYTLDYKIPHECKSGTCPTKAFPGLWEVPFNAHYVESYEGGHCPYLDQCVLHNHDADDV
LEWLQEDFTRHYEQNRAPYMMPFHTNWFQIKPLERGLHKFLNWAANLDDVWFVTMTQSLT
WMTDPRSVKSLNNYEPWKCDKKEGPKPCNLSNKCALPFKLPETNFTDTRYMETCVDCPKQ
YPWLGDSGGTGIAGTDNYIPESLSRK