| New model in OGS2.0 | DPOGS214303 |
|---|---|
| Genomic Position | scaffold979:- 86655-90842 |
| See gene structure | |
| CDS Length | 2052 |
| Paired RNAseq reads | 1621 |
| Single RNAseq reads | 3752 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004108 (0.0) |
| Best Drosophila hit | Fcp1 (6e-85) |
| Best Human hit | RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1a (1e-62) |
| Best NR hit (blastp) | PREDICTED: similar to RNA polymerase II subunit A C-terminal domain phosphatase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to RNA polymerase II subunit A C-terminal domain phosphatase [Tribolium castaneum] (7e-150) |
| GeneOntology terms | GO:0008420 CTD phosphatase activity GO:0005700 polytene chromosome GO:0005634 nucleus |
| InterPro families | IPR004274 NLI interacting factor IPR001357 BRCT IPR023214 HAD-like domain IPR011053 Single hybrid motif IPR011947 FCP1-like phosphatase, phosphatase domain IPR000089 Biotin/lipoyl attachment IPR015388 FCP1-like phosphatase, C-terminal |
| Orthology group | MCL13523 |
Nucleotide sequence:
ATGGCTGACAAAACTATGCCTATTTCTGTTCCATCCGAAAAGCCTTTAAAAGTTATAAAA
TGGAAAGTTAAGGAAGGTATTTTTGTGTCCTGTGGTCAAATATTATTTTTATACAGTGAT
TCGTCAGGCAATAAAAGTGAAGTTAAGAAATTTAAAGCATTGCGCTCTGGTACTATTGTG
TCCATCAAGGTGAAAGAAGGAGACATCGTAGAGCCTGGGGGTTGTATAGCTGATTTAGAA
CAATGCCGCCATCCCACTGTCATGAAAGAAATGTGTGCGGAATGTGGAGCCGATTTACGT
TCCGGAGAATCACAAAAAAGAGATGTAGCTGTGGTCCCCATGGTTCACTCTGTACCCGAG
TTAAAGGTATCTGAAGAATTGGCACAAAAATTAGGTCGTGAGGACGCCGATCGCTTACTT
AAAGATCGTAAACTTGTTTTGCTTGTTGATCTTGATCAAACGTTAGTGCACACCACCAAT
GACAATATACCTCCTAATATAAAAGATGTACTCCACTTCTTTCTTCGAGGTCCTGGCAAT
CAAGGCAGGTGGTGTCACACTAGATTAAGACCTAAAACCCATGAGTTCTTAGAATCTGCA
GCCAAGAATTATGAGCTACATGTATGTACATTCGGTGCGAGGCAGTATGCACATGCAATA
ACTGAATTATTGGATCCACAAAAAAAATTCTTCTCTCACAGAATTCTATCAAGAGATGAA
TGCTTCGATGCTAGGACCAAGTCAGCAAATTTGAAAGCACTATTCCCTTGTGGCGACAAC
ATGGTGTGTATTATTGATGATCGTGAAGATGTATGGCGTCATGCCAGCAACTTAATCCAA
GTGAGACCTTACTCATTCTTTCAGTCCACAGGTGATATAAATGCTCCACCGCCATTGCCT
GAAGAAAAGACGAAACTTTTAAGCGGCAAAAATGGTTCCCAAGTATCCAAAGATAATCAA
ATGCCAACACTGGATGCTGAGCCGGAGAAAGAAAATAAAGAGATCATAGAGAAAGTTAAT
TCAGATAAGAAAGATAGTGAAAACGGTATAATAAAAGATAAAAAAGATGATAAAATGGAA
AATGATGCTAATGAAAAAGTTGAAACACCAGTGTGGGTTGAATCATCCGAAGGGCAGATA
GAAGTTGATGATCCCGATGACTATTTAATATATCTAGACGACATATTAAAAAGAATACAC
AACCACTTCTATGATATATATGATAAAATGGAGAATAGTGAAAATGAGAAAAGTATCCCA
GATTTGAAATATATAATACCTGAAGTTAAAAGTCAAGTGCTGGCTGGTTCCAGTCTTGTG
TTTAGTGGTTTGGTGCCTACACACCAGAGGTTAGAGACATCAAGAGCATATCAAGTTGCA
AAAACATTAGGGGCTGAGGTCACACAAGATTTCACAGATAAAACTACACATTTAGTTGCT
ATGAGAGCAGGTACAGCGAAAGTAAATGCAAGTAAAAAGCTGGGCGAAGATAAATCAAAG
ATACATGTCGTTACACCCGAATGGCTGTGGACTTGCGCCGAGCGTTGGGAGCGTGTTGAA
GAGAAATTGTACCCTTTACAAAGAGTAGGGCAGAGCAGTTTACGCCGCCCGCCCGCGCAT
TGCAATAGCCCTCCACCAGCACCTGCGGTAAGGAAAAGGACTCCGTCCGGCCGATTCATG
GACACTATCAATCCTCTGCTGTCTTTTTCAAGCGATGATATTGCTGATATGGATAGAGAG
GTAGAAGACATTTTTAATGAATCTGATGAGAGTTCATCGGACGACGAGGAGAAGGTGCTC
GGTGATAATGATGAAGAGAATATTACTGAAGACAGACTGCTGAGTCTGGAGTCAGGAAAT
AGTGCTCAGGAAAGGTTACAAGAAAAACTCAATGAAGATTCTAATGATTCCAACACAGAA
GATGGGGAGAGAGCTCTTAAAAGGCCACGACCATCCACACCCTCGGATGATGAGGGTCCG
CCTGATGATGACGATACTTCGTGGAACCTCATGGGCGCAGCCCTAGAGAGGGAATTCCTC
GCTCAGGATTAA
Protein sequence:
MADKTMPISVPSEKPLKVIKWKVKEGIFVSCGQILFLYSDSSGNKSEVKKFKALRSGTIV
SIKVKEGDIVEPGGCIADLEQCRHPTVMKEMCAECGADLRSGESQKRDVAVVPMVHSVPE
LKVSEELAQKLGREDADRLLKDRKLVLLVDLDQTLVHTTNDNIPPNIKDVLHFFLRGPGN
QGRWCHTRLRPKTHEFLESAAKNYELHVCTFGARQYAHAITELLDPQKKFFSHRILSRDE
CFDARTKSANLKALFPCGDNMVCIIDDREDVWRHASNLIQVRPYSFFQSTGDINAPPPLP
EEKTKLLSGKNGSQVSKDNQMPTLDAEPEKENKEIIEKVNSDKKDSENGIIKDKKDDKME
NDANEKVETPVWVESSEGQIEVDDPDDYLIYLDDILKRIHNHFYDIYDKMENSENEKSIP
DLKYIIPEVKSQVLAGSSLVFSGLVPTHQRLETSRAYQVAKTLGAEVTQDFTDKTTHLVA
MRAGTAKVNASKKLGEDKSKIHVVTPEWLWTCAERWERVEEKLYPLQRVGQSSLRRPPAH
CNSPPPAPAVRKRTPSGRFMDTINPLLSFSSDDIADMDREVEDIFNESDESSSDDEEKVL
GDNDEENITEDRLLSLESGNSAQERLQEKLNEDSNDSNTEDGERALKRPRPSTPSDDEGP
PDDDDTSWNLMGAALEREFLAQD