| New model in OGS2.0 | DPOGS214383 |
|---|---|
| Genomic Position | scaffold979:+ 41937-47161 |
| See gene structure | |
| CDS Length | 1362 |
| Paired RNAseq reads | 660 |
| Single RNAseq reads | 2648 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004010 (1e-172) |
| Best Drosophila hit | CG2774 (1e-103) |
| Best Human hit | sorting nexin-2 (4e-88) |
| Best NR hit (blastp) | PREDICTED: similar to sorting nexin isoform 1 [Tribolium castaneum] (2e-142) |
| Best NR hit (blastx) | PREDICTED: similar to sorting nexin isoform 1 [Tribolium castaneum] (7e-131) |
| GeneOntology terms | GO:0006886 intracellular protein transport GO:0035091 phosphoinositide binding GO:0005515 protein binding GO:0007154 cell communication |
| InterPro families | IPR001683 Phox homologous domain IPR015404 Vps5 C-terminal |
| Orthology group | MCL14074 |
Nucleotide sequence:
ATGTCGGCGGAGACCGATGCACCGTTCAATAATGTGGAAATAAGTAACGAGAACCGGGAA
GAGGAAGATCTATTCGCCTCGGCGGTACAGGAGGTCAGTCTAGATCCTGAAATTAATGGT
ACCCAAGATGGATTAGAAAAGTCAACAATAGATGACATTTCGGTTTCATCACCCGCTACT
ATTGGCAGTTCTATTATGGAGGAAATAGCAACAGAACGTGCTAACAATATTATAATAACA
ATAACCGAGCCTCAAAAGATTGGTGAAGGGATGAGCTCATATGTAGCCTACCGTGTCATC
ACCAAAACAAACATGCCAATCTTTAGCAAATTAGATTTTGCGGTTCTAAGGCGATTCTCC
GATTTTCTAGGACTTCATGAGAAATTGACCGAGAAATACTTGCGCTCTGGTAGAATTATA
CCTCCAGCACCAGAAAAAAGTATCATGGGAACAACAAAGTTGAAGATGTCATCGACTCCG
TCTACAGAGAGTGCTAATGGCTCACCGTCGGTTCAATCACAGTTTGTGGAACGAAGACGA
GCTGCCCTGGAGAGGTTCCTGAACAGAGTAGCCCAACATCCTGTACTGTGTATTGATCCC
GATTTCAGAGAGTTTTTGGAGTCTGACACTGAACTACCAAAGGCCACGAGTACCTCGGCG
CTTAGTGGAGCTGGTATGCTGCGACTCTTCAATAAAGTTGGAGAAACAGTCAACAAGATC
ACATACAGGATGGACGAGTCCGATCCTTGGTTCGAAGAGCGCGTGGCTCGTATAGAGTCT
CTGGAAAGCGGTCTACGGCGTCTGTGTGGGGCCTGTGAGGCGCTCGCTACTGAGAGACGT
GAACTGGCGGGGCGAGCTCATGAGGCGGCTCGGGCCATCGCCGGATATATATACATATAT
TTTTTTAATATTAAAATAAACTTTGAAATTGAAGAGAATGAACAAGCCAACACAGACTTC
TATGTTCTGACCGAACACATTAAAGATTATCTCGGATTAATTGGTGCTATCAAAGACGTG
TTCCATGAAAGAGTTAAGGTATTCCAACACTGGCAACACTCACAAATGCAGCTAACGAAG
CGGAGGGAAAACAAAGCGAAAGCGGAACTGGCCAACCGTCCGGAGAAAATCGAACAGGCC
GCTAATGAAATTATTGAGTGGGAGTCGAAAGTGGAACGCGGCCAGCAGGAGTTTGATACA
ATGTCGAGGGTCATCAAGAAGGAACTGGAACGCTTTGAAGAGATCCGCCTCGACCAGCTC
AGAGACACGCTGCTGCGGTATCTTGATGAGCATATGAAACACCAGGCACAGGCTATTCGG
TACTGGGACGCTTTCCTTCCTGAGGCCCGCGCCATCAAATGA
Protein sequence:
MSAETDAPFNNVEISNENREEEDLFASAVQEVSLDPEINGTQDGLEKSTIDDISVSSPAT
IGSSIMEEIATERANNIIITITEPQKIGEGMSSYVAYRVITKTNMPIFSKLDFAVLRRFS
DFLGLHEKLTEKYLRSGRIIPPAPEKSIMGTTKLKMSSTPSTESANGSPSVQSQFVERRR
AALERFLNRVAQHPVLCIDPDFREFLESDTELPKATSTSALSGAGMLRLFNKVGETVNKI
TYRMDESDPWFEERVARIESLESGLRRLCGACEALATERRELAGRAHEAARAIAGYIYIY
FFNIKINFEIEENEQANTDFYVLTEHIKDYLGLIGAIKDVFHERVKVFQHWQHSQMQLTK
RRENKAKAELANRPEKIEQAANEIIEWESKVERGQQEFDTMSRVIKKELERFEEIRLDQL
RDTLLRYLDEHMKHQAQAIRYWDAFLPEARAIK