DPGLEAN16522 in OGS1.0

New model in OGS2.0DPOGS212816 
Genomic Positionscaffold344:+ 66311-67754
See gene structure
CDS Length726
Paired RNAseq reads  130
Single RNAseq reads  328
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA000760 (1e-102)
Best Drosophila hit  CG17209 (7e-59)
Best Human hitDNA-directed RNA polymerase III subunit RPC1 (4e-56)
Best NR hit (blastp)  AGAP004703-PA [Anopheles gambiae str. PEST] (4e-74)
Best NR hit (blastx)  AGAP004703-PA [Anopheles gambiae str. PEST] (1e-71)
GeneOntology terms




  
GO:0006383 transcription from RNA polymerase III promoter
GO:0003899 DNA-directed RNA polymerase activity
GO:0005666 DNA-directed RNA polymerase III complex
GO:0003677 DNA binding
GO:0008270 zinc ion binding
GO:0032549 ribonucleoside binding
InterPro families
  
IPR007080 RNA polymerase Rpb1, domain 1
IPR015700 DNA-directed RNA polymerase III largest subunit
Orthology groupMCL31120

Nucleotide sequence:

ATGCCTAAAGAGCAGTACCGAGAGACTTATGTCGGCAGAAAAATTTCCCATGTTACTTTT
AATGTGGATAGTGCAACGGAAATCCAGCAAGCAGCTCATATTCAAGTGATAACAAAGAAC
TTGTATGCTCAGGATGGACAGAGAGTACCAGCTAGCTATGGAGTGCTGGACAGACGCATG
GGGACAAACCAGAAAGATGCCAACTGTGAAACATGTGGTTTAGGTCTAGCTGAGTGTGTT
GGTCACTATGGCTATGTGGAACTAGCTCTACCGGTGTTCCATGTCGGATACTTCAGATCT
ATTATAACTATACTTCAGACTATTTGTAAGAACTGTGCCAAAGTAATGCTTCCGGATACA
ATCAAGAAATCGTTCAGTCGTAAATTCATGCATCCAGATTTAACCTACCTGCATAAAAAG
AATCTACGGGCAGCCGTTTTAAAGAAAGCCAAGACATGCACAAAATGCCCGTACTGTGAA
TCCCTAAATGGCATCGTAAAGAAGAGTCCAGCGGGAATATTGAAAATTATCCACGATAAG
TACAGAACAAAGAAACCCACAGACCCTGCGGTTCAAAAGGTGTTGAAAGATTTCAACGAG
GCCAAGGAATCTAATAAGGAACTGGCGTCCATGATTAACAGCGGCTTGATAATAGAAATG
AGCCCATTAGAAGTGAGTGTTATAACACTTTGTTATCTGACAAATGTTACCATCCTAGCT
CAGTAA

Protein sequence:

MPKEQYRETYVGRKISHVTFNVDSATEIQQAAHIQVITKNLYAQDGQRVPASYGVLDRRM
GTNQKDANCETCGLGLAECVGHYGYVELALPVFHVGYFRSIITILQTICKNCAKVMLPDT
IKKSFSRKFMHPDLTYLHKKNLRAAVLKKAKTCTKCPYCESLNGIVKKSPAGILKIIHDK
YRTKKPTDPAVQKVLKDFNEAKESNKELASMINSGLIIEMSPLEVSVITLCYLTNVTILA
Q