| New model in OGS2.0 | DPOGS203620 |
|---|---|
| Genomic Position | scaffold10054:- 1031-4245 |
| See gene structure | |
| CDS Length | 1044 |
| Paired RNAseq reads | 20 |
| Single RNAseq reads | 54 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007290 (2e-62) |
| Best Drosophila hit | ionotropic receptor 75d, isoform A (1e-24) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (8e-58) |
| Best NR hit (blastx) | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (1e-51) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
| InterPro families | IPR001320 Ionotropic glutamate receptor |
| Orthology group | ND |
Nucleotide sequence:
ATGCCTGAAGGCAACTGGAAGGTAGAGACATTTGGTACTTGGACTTATGAAATGGGTTTA
AAGAAATTGATAACTATGAATATTCCGAGTTCCCAGAGACGTAGAAATTTAGAAGGGACG
AAAATTGGAACCTCCATGGTGGTCAACGATAATGATACACGAATGGATATTTTAAGCATG
AGAAATTTGAATACGGATCATCTAACGAAGGCCGGTTACAGACAAATCTTGCCGTTATAC
TATTTCATGAATGCCACCCTGATAACCGTGTTCACGGACACTTGGGGGTATTTGAGGAAC
GGTTCCTATGATGGTATGATCGGTGAGGTGACCCGGGGTACGGCGGAACTGACAGGAACT
CTGGGTAGAGTAGTGATGTTCCTGATGTTCTTCGTATTCCTTTTCTTGCATACGTCATAT
TCAGCCAACATAGTTGCTTTACTTCAATCCAGCTCCAATGACATAAAGACATTGGCTGAT
CTGTTAAACTCTAAATTAGAACTCGGTGCGGAGGACACGCCTTATAATAGACAGCATTTA
TCCACCGCTTCCGAACCAATAAGGAAGGCTATTTACGAAAAGAAAATAGCTCCAGCTGGA
TCTAAGCCCAATTTTATGACTTTGGAAGAAGGAGTGAAGAGAATTCAGATGAAACCGTTC
GCTTTTCACATGTACCTCGGCGGTGGATACCGTCTCGTAGAGAAATATTTCCTGGAGCAC
GAGAAGTGCGGACTGCAAGAGATTCAGTTTAACCACGAGACTATACCCTGGGTCACGTGC
CGTAAGAACTCGCCGTACAAGGAGATATTTAAAATAGGTTTATTGAGGAATCAGGAGCAC
GGTCTGAATGATCGCGTCAACCGTTTAATATACTCTCGCAAGCCTGTTTGTTCGGTTCAC
GGAGGTACCTTTGGTTCCGTGAATATGACCGACTTCTATCCAGCTCTCCTGATGCTGGTA
TATGGAATGATAGCTTCTCTTCTTCTGTTGGCTATCGAATGCTTGGCTTCACAACACTTA
TGTCATATTCGAAACAGAATCTGA
Protein sequence:
MPEGNWKVETFGTWTYEMGLKKLITMNIPSSQRRRNLEGTKIGTSMVVNDNDTRMDILSM
RNLNTDHLTKAGYRQILPLYYFMNATLITVFTDTWGYLRNGSYDGMIGEVTRGTAELTGT
LGRVVMFLMFFVFLFLHTSYSANIVALLQSSSNDIKTLADLLNSKLELGAEDTPYNRQHL
STASEPIRKAIYEKKIAPAGSKPNFMTLEEGVKRIQMKPFAFHMYLGGGYRLVEKYFLEH
EKCGLQEIQFNHETIPWVTCRKNSPYKEIFKIGLLRNQEHGLNDRVNRLIYSRKPVCSVH
GGTFGSVNMTDFYPALLMLVYGMIASLLLLAIECLASQHLCHIRNRI