DPGLEAN16524 in OGS1.0

New model in OGS2.0DPOGS204832 
Genomic Positionscaffold10511:+ 173-4629
See gene structure
CDS Length1749
Paired RNAseq reads  130
Single RNAseq reads  322
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA001572 (0.0)
Best Drosophila hit  CG32533 (4e-166)
Best Human hitprobable ATP-dependent RNA helicase DHX34 (8e-149)
Best NR hit (blastp)  ATP-dependent RNA helicase [Aedes aegypti] (0.0)
Best NR hit (blastx)  PREDICTED: similar to ENSANGP00000016870 [Nasonia vitripennis] (0.0)
GeneOntology terms




  
GO:0004386 helicase activity
GO:0005634 nucleus
GO:0004004 ATP-dependent RNA helicase activity
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0005524 ATP binding
GO:0003676 nucleic acid binding
InterPro families

  
IPR001650 Helicase, C-terminal
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014001 DEAD-like helicase
Orthology groupMCL11431

Nucleotide sequence:

ATGGATTATAAATCCAAAAATTATGGATCCTCAAGTAAAAGAAGACGTTCCTATTCTCCT
GAATTTGACTCCCGGGATAGACACAAGTCGAGAAGAACAAGCCCGTCTAAATTAGAAAAA
AACGATGAATTTAGTTTTTTGGATCACAAAAGAAATTTAAACAAAATAATCTCTTATAGC
AATGATGGTAATCCCATTGTGAAAAACCTAGATGATTTTTGGGTATTTGTCAAAAAATAT
GAAGCTACATTGAAAAAAGCGGGAAAACCTATCTTAGAAAGACAAACAGATGTCACAGAA
TATAATGATATTGGTATACCTATTAACTTTTCTAAACATCATTGTATTAATTTTATTAGC
AAAATAAAATTCATGGATGTCTGTGATGAGAGAAACAACAAAAAGTTAAATAAAGATACT
TTTGATATATTTCTTAATATAGTATCTATATATTTAGACTTTAAAAATAAAGAAAAATTT
GATAGATTAAAAAAATTACGTAAAGCTCAAAGTGAATTACCAGTCGCTAAATACAGGAAT
GAAATAGTATCAGCAGTAAAAAATGAAAGAGTGGTGATCGTAGCCGGAGACACAGGTTGC
GGTAAATCAACACAAGTGCCACAATACTTACATGAAGCGGGATTTCAAAATATAGCTTGC
ACTCAACCTAGAAGAATCGCATGTATTTCACTGTCGAAGAGAGTGTCATACGAAATGCTA
ACCCAGTTTGATACTAAAGTTGGCTATCAGATCAGATTCGAGAAAAGCAAGACATCGGAC
ACCAAAATATGCTTCATCACTGAAGGTTTGCTTCTGAGGCAGATGTCTTCAGATAATCTG
CCCGAGTATGATGTTATAATTCTAGATGAGATACATGAACGTCACCTCATGGGTGATTTC
CTACTGGGTGTACTTAAATGCCTCATCCACACAAGAACTGATATTAAACTCGTTCTCATG
TCAGCGACTATTAATATAAAACTGTTCCAGGATTACTTTTCAGCCGAATCAGCTGTAGTT
ATACAGGTCCCCGGCAGACTCTTTTCGATAGAATTAAATTACAAACCTATACTCATAGAA
GAAAAACCTTCTAGGCACGATAAATTAGATCCTCAGCCATACGTACAGATTATGCAGTTG
ATAGATAGCAAATATCCAAAGGAGGAAAGGGGTGACCTGTTGATATTTATGTCCGGTGTA
CAAGAAATAACGACAATATGCGACGCGGCGCAGCAATACGCGGAGAAAACAAAGAGTTGG
ATCGTACTTCCCTTGCACAGTGCGTTGTCGCTTAGTGAACAAGATAAGGTGTTCGACTAT
CCGCCAGATGGCGTTAGGAAATGTATAGTCTCAACGAACATAGCCGAAACATCTGTCACC
ATAGATGGCATAAGATTTGTCATTGACTCCGGGAAGGTCAAAGAGATGAGTTATGATTCG
TCAACAAAAATGCAAAGGTTGAAAGAATTCTGGATTTCAAAGGCAAGCGCTGATCAGAGG
AAGGGGAGAGCGGGCAGGACTGGTCCAGGTGTTTGTTACAGAGTTTATTCAGAGCAGCAG
TTCACCGAAATGGAACCGTACAGCACCCCCGAGGTGTCCCGGGTGCCGATTACGTCACTG
TTACTGTTGATGACGTCACTGGGCGTTAATGACGTCAGACGGTTCCCCTTCATCGATGCC
CCAAGTGATGCCGCTATCGAAGACGCTCTGTTAGAGTTGAAGCAGCACGTTAGTAGCACC
ATACGATAA

Protein sequence:

MDYKSKNYGSSSKRRRSYSPEFDSRDRHKSRRTSPSKLEKNDEFSFLDHKRNLNKIISYS
NDGNPIVKNLDDFWVFVKKYEATLKKAGKPILERQTDVTEYNDIGIPINFSKHHCINFIS
KIKFMDVCDERNNKKLNKDTFDIFLNIVSIYLDFKNKEKFDRLKKLRKAQSELPVAKYRN
EIVSAVKNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACISLSKRVSYEML
TQFDTKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSDNLPEYDVIILDEIHERHLMGDF
LLGVLKCLIHTRTDIKLVLMSATINIKLFQDYFSAESAVVIQVPGRLFSIELNYKPILIE
EKPSRHDKLDPQPYVQIMQLIDSKYPKEERGDLLIFMSGVQEITTICDAAQQYAEKTKSW
IVLPLHSALSLSEQDKVFDYPPDGVRKCIVSTNIAETSVTIDGIRFVIDSGKVKEMSYDS
STKMQRLKEFWISKASADQRKGRAGRTGPGVCYRVYSEQQFTEMEPYSTPEVSRVPITSL
LLLMTSLGVNDVRRFPFIDAPSDAAIEDALLELKQHVSSTIR