New model in OGS2.0 | DPOGS204832  |
---|---|
Genomic Position | scaffold10511:+ 173-4629 |
See gene structure | |
CDS Length | 1749 |
Paired RNAseq reads   | 130 |
Single RNAseq reads   | 322 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001572 (0.0) |
Best Drosophila hit   | CG32533 (4e-166) |
Best Human hit | probable ATP-dependent RNA helicase DHX34 (8e-149) |
Best NR hit (blastp)   | ATP-dependent RNA helicase [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to ENSANGP00000016870 [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0004386 helicase activity GO:0005634 nucleus GO:0004004 ATP-dependent RNA helicase activity GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005524 ATP binding GO:0003676 nucleic acid binding |
InterPro families    | IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014001 DEAD-like helicase |
Orthology group | MCL11431 |
Nucleotide sequence:
ATGGATTATAAATCCAAAAATTATGGATCCTCAAGTAAAAGAAGACGTTCCTATTCTCCT
GAATTTGACTCCCGGGATAGACACAAGTCGAGAAGAACAAGCCCGTCTAAATTAGAAAAA
AACGATGAATTTAGTTTTTTGGATCACAAAAGAAATTTAAACAAAATAATCTCTTATAGC
AATGATGGTAATCCCATTGTGAAAAACCTAGATGATTTTTGGGTATTTGTCAAAAAATAT
GAAGCTACATTGAAAAAAGCGGGAAAACCTATCTTAGAAAGACAAACAGATGTCACAGAA
TATAATGATATTGGTATACCTATTAACTTTTCTAAACATCATTGTATTAATTTTATTAGC
AAAATAAAATTCATGGATGTCTGTGATGAGAGAAACAACAAAAAGTTAAATAAAGATACT
TTTGATATATTTCTTAATATAGTATCTATATATTTAGACTTTAAAAATAAAGAAAAATTT
GATAGATTAAAAAAATTACGTAAAGCTCAAAGTGAATTACCAGTCGCTAAATACAGGAAT
GAAATAGTATCAGCAGTAAAAAATGAAAGAGTGGTGATCGTAGCCGGAGACACAGGTTGC
GGTAAATCAACACAAGTGCCACAATACTTACATGAAGCGGGATTTCAAAATATAGCTTGC
ACTCAACCTAGAAGAATCGCATGTATTTCACTGTCGAAGAGAGTGTCATACGAAATGCTA
ACCCAGTTTGATACTAAAGTTGGCTATCAGATCAGATTCGAGAAAAGCAAGACATCGGAC
ACCAAAATATGCTTCATCACTGAAGGTTTGCTTCTGAGGCAGATGTCTTCAGATAATCTG
CCCGAGTATGATGTTATAATTCTAGATGAGATACATGAACGTCACCTCATGGGTGATTTC
CTACTGGGTGTACTTAAATGCCTCATCCACACAAGAACTGATATTAAACTCGTTCTCATG
TCAGCGACTATTAATATAAAACTGTTCCAGGATTACTTTTCAGCCGAATCAGCTGTAGTT
ATACAGGTCCCCGGCAGACTCTTTTCGATAGAATTAAATTACAAACCTATACTCATAGAA
GAAAAACCTTCTAGGCACGATAAATTAGATCCTCAGCCATACGTACAGATTATGCAGTTG
ATAGATAGCAAATATCCAAAGGAGGAAAGGGGTGACCTGTTGATATTTATGTCCGGTGTA
CAAGAAATAACGACAATATGCGACGCGGCGCAGCAATACGCGGAGAAAACAAAGAGTTGG
ATCGTACTTCCCTTGCACAGTGCGTTGTCGCTTAGTGAACAAGATAAGGTGTTCGACTAT
CCGCCAGATGGCGTTAGGAAATGTATAGTCTCAACGAACATAGCCGAAACATCTGTCACC
ATAGATGGCATAAGATTTGTCATTGACTCCGGGAAGGTCAAAGAGATGAGTTATGATTCG
TCAACAAAAATGCAAAGGTTGAAAGAATTCTGGATTTCAAAGGCAAGCGCTGATCAGAGG
AAGGGGAGAGCGGGCAGGACTGGTCCAGGTGTTTGTTACAGAGTTTATTCAGAGCAGCAG
TTCACCGAAATGGAACCGTACAGCACCCCCGAGGTGTCCCGGGTGCCGATTACGTCACTG
TTACTGTTGATGACGTCACTGGGCGTTAATGACGTCAGACGGTTCCCCTTCATCGATGCC
CCAAGTGATGCCGCTATCGAAGACGCTCTGTTAGAGTTGAAGCAGCACGTTAGTAGCACC
ATACGATAA
Protein sequence:
MDYKSKNYGSSSKRRRSYSPEFDSRDRHKSRRTSPSKLEKNDEFSFLDHKRNLNKIISYS
NDGNPIVKNLDDFWVFVKKYEATLKKAGKPILERQTDVTEYNDIGIPINFSKHHCINFIS
KIKFMDVCDERNNKKLNKDTFDIFLNIVSIYLDFKNKEKFDRLKKLRKAQSELPVAKYRN
EIVSAVKNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACISLSKRVSYEML
TQFDTKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSDNLPEYDVIILDEIHERHLMGDF
LLGVLKCLIHTRTDIKLVLMSATINIKLFQDYFSAESAVVIQVPGRLFSIELNYKPILIE
EKPSRHDKLDPQPYVQIMQLIDSKYPKEERGDLLIFMSGVQEITTICDAAQQYAEKTKSW
IVLPLHSALSLSEQDKVFDYPPDGVRKCIVSTNIAETSVTIDGIRFVIDSGKVKEMSYDS
STKMQRLKEFWISKASADQRKGRAGRTGPGVCYRVYSEQQFTEMEPYSTPEVSRVPITSL
LLLMTSLGVNDVRRFPFIDAPSDAAIEDALLELKQHVSSTIR