| New model in OGS2.0 | DPOGS214699 |
|---|---|
| Genomic Position | scaffold43:- 10666-19502 |
| See gene structure | |
| CDS Length | 3756 |
| Paired RNAseq reads | 3412 |
| Single RNAseq reads | 7976 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004765 (1e-118) |
| Best Drosophila hit | SMC2 (2e-161) |
| Best Human hit | structural maintenance of chromosomes protein 2 (0.0) |
| Best NR hit (blastp) | structural maintenance of chromosome, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 8 [Pan troglodytes] (1e-172) |
| GeneOntology terms | GO:0007076 mitotic chromosome condensation GO:0005634 nucleus GO:0051301 cell division GO:0000796 condensin complex GO:0005737 cytoplasm GO:0000166 nucleotide binding GO:0007067 mitosis GO:0005515 protein binding GO:0000793 condensed chromosome GO:0046982 protein heterodimerization activity GO:0044403 symbiosis, encompassing mutualism through parasitism GO:0007049 cell cycle GO:0000228 nuclear chromosome GO:0005524 ATP binding |
| InterPro families | IPR003395 RecF/RecN/SMC IPR010935 SMCs flexible hinge |
| Orthology group | MCL13674 |
Nucleotide sequence:
ATGTATATAAAGTCTATCACACTCGATGGCTTTAAGTCCTACGGGAATCGAGTGGAAGTG
AATGGATTTGATCCCGAGTTTAATGCTATCACAGGACTAAATGGGACCGGAAAGTCTAAT
ATCCTAGATTCAATATGTTTTGTTTTAGGCATTACCAATCTTTCTAATGTGAGGGCTGGA
AGTCTTCAAGAACTGATCTATAAGCATGGTCAGGCCGGAATCACCAAGGCCACCGTTAGC
ATCACCTTTGACAATCGTGACAAGAGGCAGTGTCCCATCGGTTATGAGAACCACGATGAG
ATAACTGTTACAAGACAGGTGGTGATGGGAGGTAAGAACAAGTACTTGATTAATGGCATC
AATGTTCAGAACAAGCGGGTCAGTGACCTCTTCTGTTCCGTGCAGCTCAATGTGAACAAT
CCTCACTTCCTCATCATGCAGGGTCGGATCACTAAAGTGCTCAACATGAAGCCTCCTGAA
ATATTGTCAATGGTGGAGGAAGCAGCCGGGACGAGAATGTACGAAGCCAAGAAACAAGCT
GCACAGAAAACTATAGAAAAAAAAGACGCCAAGCTCAGAGAATTGAATGATATAATTAGG
GAGGACATCGCCCCCAAGCTGCAGAAGCTGCAAGACGAACGCTCGCAGTTCCAGGAATAC
CAGAAAGTGGTCCGCGAGCTGGAGAATCTTACCAGGCTTTATGTGGCTTGGAAATACGTA
TCCGCGGAGGAGAGCGCCAAGGAAGCCGCGAACAAGGTCACGGAGGTCCAGGACGAGATC
AAAGACAAGAAAGAAATGATTTTGAACAATGAAAAAGAAGCCAAAGAGTACGACAAGAAA
ATAGCTGCACTCAATAAGAAGTTAGATGAGGAGAGCGGCAGCGTGCTCAGGGAGTTGGAG
ACGGAGCTGCAGGCGGCGGAGAAGACGGAGGCGAAGAGCGCGGCGGACTGGCGCGCGGCC
CAGGGCGCCCTCACCACGCATCACGGCCGCGCCAGGCTCGCCTCGCGCGCCTTGGACGAC
GACCGCGCCGCGCTCAGGGACAAGGAGGCGCAGCTGCATGAGGTGTCGAGTACGTTCGAC
CGTCTGCGGGAGGCGTGCACCACGAGCGAGGCCCGCTTGGCCGCGACGCAGGCCCGCTTC
CTGGCCGTGAGCGCCGGCAACGAGGACGCCTCGGAGTCACTGCAGGACCAACTCATAGCG
GCGAAGCAAAAAGCGTCGGAAGCGTCGACTCGAATATCACAGAGTCAGATGGAGAAGAAA
CATGCGGAAGATCGCCTCGTCACCCTCGAGAAGGAATTCAAGAGTAGCAGCGCGCAGTAC
CAGAGAGATATGGAGGGGATCGCCCGCCACAGGGCCGAGGTGGCACAGCTGGAGGCTCAG
TTATCGTCGAGTACGTTCAGTGCTGATCGTCGGAGCGCCCTCCAAGATCAGCTGCGGGCG
TTGCGGGCCGGGGGGCGGGAGAGGAGGGACCGCGCCGACCAGCTCGCAGCACGACTGCAG
CGGTGTCACTTCAAGTACACGCCGCCCACCGCCAACTTCGACTCTAACAAAGTATCCGGT
ACCGTCTGCAGACTCATAGACGTGCGGGATCCGAAGTACTGCACGGCGCTAGAGACGGCG
GCGGGGGGACGGCTGTACAACGTGGTGGTGGACACGGACGAGACCAGTAAGCTGCTGCTG
CAGCGAGGACAGCTGCAGTCCCGGACCACCATCATCCCTCTCAACCGCATCTCCTCACAA
CCTCTGTCGCGGGAGACGGTCGCGTTGGCGCAGAAAATCGGCGGCGGCCCGTCCGAGGTT
CAGTTGGCGCTCGACCTGATCGACTTCCCGCCCTCGCTCCGCCCAGCCATGTCGTGGGTG
TTCGGCAACACGTTGGTGTGCAGTTCCCTGGAGGCGGCGCGCCGCGTGACCTTCGACCCT
CGCGTCAGATGTCGCTCCGTGACCCTGGACGGGGACGTGTTCGACCCGGCGGGCACGCTG
TCGGGGGGAGCGCGAGCGAGGGGCGGCTCGCTGCTGCTGGAACTGAAGGACCTCAAACAC
CTGGAGCGGCAGCTCGCGGAGGAGGACGAGCTGCTCGCCACACTCACCCGCGACCTGGAC
TCCATGCAACACGCCGCTGACCAGCACGCCGCACTGCAGCAGAGGTTGGAGATGAGTCGC
CACGCGCTGGCGGTGAGCGAGGAGCGCGCCGCCAGCACCGCCACCGCCCAACTGCACGCA
GAGATACAGGCCTTGAAAGATAACCGACGCGGGCTGGAGAACAGAAGAGCGAGACGCTTC
GTATGCAGTGACGAAGCATACGTGTTCCGAGGTCCCCTCGTCCGCACCGCCACAGTTAAA
CGACACGCCTCACACCCGCTGGGGCACATTTCCTCGATAACTGAAGGTGAAGAACACGAG
AACCATGACAGAAACGGTCTTGATCGGGACTCATTGGCTGTTGTTGTTGCAGGTCGCGCG
GCTGACTGCGGCCGTGGAGGAGGACGGACGCACCCGGCAAGAGACGGCAGCCCGCGCCAG
GGAGCTCGAGCTCAAGAACGCGATACTCTGTGGGCGCTCTTCCCGCCCCTGCACCTCGGG
AGGGGAGACTCAATTCCGGAGTACAAGAAGGCCGAGGAGGAGTTGAAGCTCGCCAAGAAG
GAGGCGGAACAACACACCGCCTCCTGGAGACAGAGGGAGCAGGAGCACGACACGCTGCGG
CTCGAGCTGGACGAGCTGCGCCGCGCCGTGGACTGCGGACAACAGGCGCTGGAGCGAGCC
CGGGACAGCGGACGAGAGCTGGAGGAAGCGCTGGAGCGAGCCCGGGAGATACATGACGCA
CACGCGAACGAAGTTAAGGAGATACAGACGAAGATCAAGATACAGAAAGCGGAGATAGCG
AGTCGCAGCGGAGAGGTGGCCGCCCTGACGAAGGGGAGGGACGAGCTGCTCGGGCGGAAC
AGAGACCTGGAGCTGGACGTGAAGCAGCTGGAGTACCGCTGCAGGGAGCTGCAGCAGGAG
GCGGCGGAGGGGGAGAGGAAGATCAAGTCCTTGGTGGTGGAGAACCCTTGGATCCCGTCA
GAGCGTCAGTACTTCGGTCTGTCCGGAGGCGCCTTCGAGTTCGGGCGCGACGTGAGCTCT
GGCGGAGCGCGCCTCGCCCAGCTCAGGGACAGGAAGGACCGGCTGGCGAGAGGACTCAAC
GCACGAGCTCACACCTTGCTGGGGAAGGAGGAGGAGCAGTACCAAGACGTGATGCGCAAA
AAGAAAATAGTGGAAGCCGACCGCGCCAAGCTGGTGCAGGTGATGGCGGAGCTGGACGAC
AAGAAGCGGAGGACGCTGCTGACGGCCTGCGAACAGGTCAACAGGGACTTCGGATCCATC
TTCAGCAGTCTGCTACCCGGCGCACAGGCGCGCCTCACCCCGCCGCCGGGACAGAACGTG
TTGGACGGTCTGGAGGTGAAGATCGGGTTCAACAACACGTGGAAGGAGTCCCTGGGCGAG
TTGTCCGGGGGTCAGCGGTCGCTGGTGGCGCTGTCCCTGGTGCTGGCGCTGCTGCTGTTC
CGCCCCGCGCCTCTCTACATCCTGGACGAGGTGGACGCCGCCCTGGACCTGTCGCACACA
CAGAACATCGGCCGGATGCTCAAGGAGCACTTCACGCACTCGCAGTTCATCATAGTGTCT
CTGAAGGACGGCATGTTCAACAACGCCAACGTGCTGTTCCGCACGAGGTTCGCCGACGGC
ATGTCCGCCGTCACCAGGACCGACAACAGGAGGTAG
Protein sequence:
MYIKSITLDGFKSYGNRVEVNGFDPEFNAITGLNGTGKSNILDSICFVLGITNLSNVRAG
SLQELIYKHGQAGITKATVSITFDNRDKRQCPIGYENHDEITVTRQVVMGGKNKYLINGI
NVQNKRVSDLFCSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMVEEAAGTRMYEAKKQA
AQKTIEKKDAKLRELNDIIREDIAPKLQKLQDERSQFQEYQKVVRELENLTRLYVAWKYV
SAEESAKEAANKVTEVQDEIKDKKEMILNNEKEAKEYDKKIAALNKKLDEESGSVLRELE
TELQAAEKTEAKSAADWRAAQGALTTHHGRARLASRALDDDRAALRDKEAQLHEVSSTFD
RLREACTTSEARLAATQARFLAVSAGNEDASESLQDQLIAAKQKASEASTRISQSQMEKK
HAEDRLVTLEKEFKSSSAQYQRDMEGIARHRAEVAQLEAQLSSSTFSADRRSALQDQLRA
LRAGGRERRDRADQLAARLQRCHFKYTPPTANFDSNKVSGTVCRLIDVRDPKYCTALETA
AGGRLYNVVVDTDETSKLLLQRGQLQSRTTIIPLNRISSQPLSRETVALAQKIGGGPSEV
QLALDLIDFPPSLRPAMSWVFGNTLVCSSLEAARRVTFDPRVRCRSVTLDGDVFDPAGTL
SGGARARGGSLLLELKDLKHLERQLAEEDELLATLTRDLDSMQHAADQHAALQQRLEMSR
HALAVSEERAASTATAQLHAEIQALKDNRRGLENRRARRFVCSDEAYVFRGPLVRTATVK
RHASHPLGHISSITEGEEHENHDRNGLDRDSLAVVVAGRAADCGRGGGRTHPARDGSPRQ
GARAQERDTLWALFPPLHLGRGDSIPEYKKAEEELKLAKKEAEQHTASWRQREQEHDTLR
LELDELRRAVDCGQQALERARDSGRELEEALERAREIHDAHANEVKEIQTKIKIQKAEIA
SRSGEVAALTKGRDELLGRNRDLELDVKQLEYRCRELQQEAAEGERKIKSLVVENPWIPS
ERQYFGLSGGAFEFGRDVSSGGARLAQLRDRKDRLARGLNARAHTLLGKEEEQYQDVMRK
KKIVEADRAKLVQVMAELDDKKRRTLLTACEQVNRDFGSIFSSLLPGAQARLTPPPGQNV
LDGLEVKIGFNNTWKESLGELSGGQRSLVALSLVLALLLFRPAPLYILDEVDAALDLSHT
QNIGRMLKEHFTHSQFIIVSLKDGMFNNANVLFRTRFADGMSAVTRTDNRR