| New model in OGS2.0 | DPOGS214760 |
|---|---|
| Genomic Position | scaffold43:+ 20162-27184 |
| See gene structure | |
| CDS Length | 3522 |
| Paired RNAseq reads | 2788 |
| Single RNAseq reads | 6836 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004754 (5e-69) |
| Best Drosophila hit | Nup133 (1e-41) |
| Best Human hit | nuclear pore complex protein Nup133 (2e-22) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008819 [Tribolium castaneum] (3e-123) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (5e-93) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL12358 |
Nucleotide sequence:
ATGGAGTTTAACAGCACAGGAGGAATGAGGAGTCCTTTTTCTCCTCGAGTACGACAATCT
ATCTCGGGGCGAAGACCTATTGGACTGGGTTCGGCAAAGAAAAATAGCAAGTTCATGCAA
CAGTCAGAGCAACAAACCGGCGAAATTGTATATAAAACTCCCTTCACGACTCTGGAAACA
TTCGGAACACCACTTCCAGTAATGGTTACAGAAACTCTTACCTTTCCATCTAGTGAGGTA
AGTGTCCGTCTGTCCTCCTGTGGTTGGTGTTGGGCGGTCTGTGGGCGTAAAGTGCTAGCG
TGGCCCTGGGACACCTCACTCCCTGCTGCCACCGCTCGTGATCTCACACTGCCACAGACA
GACCTGGCACACAAAGCTGATTTAGTTGTTCTGTTCTACGAGAATGATGCACAGTTGCCA
TCCTGTATTGGTGTGTCTCCGGAGGGGGTGGTCCGCTACTGGTCCAGTGTAGGGGCGGAG
GGCGCGTCGTGTGACGTGTCGTGTGAGCTCGCTGGCCAAGAGTGTGACAGGCTCATACAG
GCCAGGGATGGACTGCTGCTGGCCACCACCACCTGCACCCTGGTCAGAATCACTACTACT
AAGGAGGCTCGTCCGTCCGTGGTGTGTCACACTCTCCGTCCCCCGAGCGGCTGGCTGGGA
GGTCTGGGCCGACGAGTGTCAGTACTGTTCTTCGGTTCCATGCCGGCTAACCATGACACG
AAACTGGTGAAGGTGGTGTTGCTGAGCAGTCCTCGTGCGGACGAGCAGGCAGCGGACAAG
GAGTGCGTGGCGCTGGTGGCCGGCGGACCGCTCGTGCAGTTGTGGGAGGATGGCGACGTC
AGGGAGGTCTCGCTTCGGAGACCGCTCTGTGACGCGCTGGCCAGGACGCACCTCGCGCCC
GCCGGTGAGCTGAGCGGGCTGGAGGTAGCGGCGCTGGACGCGGAGCCTCACCCCGGTGGC
GGCCTGCTGCTGCTGCTGCTGCTGACCGTGGCCGCGCCTCGCGCTCCCGATGCTAGATAT
GCCCTCGCTCACGTATCCTTGGAGTCCGAGGAGCGTGTCCGCGTGTTGTCGGCGTGGTGT
GTGAGGGGCGCACGCTCCGAGAGCCTCCCCCGCTGCCTGCCGCTGCAACCCCCGCTGGTC
TACAACAGCGACGCAATCATCGGAGTCGCTCGTACGGATCACTCTACACTCAGCCTTAGC
CCGGGTTTACACCGTCACACGACTTGCCGAGCTTTTATAATTGGTCATTCAAAAACCTTC
GCCGAGACTTTCGTGAGCGAAGCGTCGGGCAAGGATCAGGCGGACGTGTTGGAAGTGTCT
GCGGAGGGCGACTCCATCCTGGGAGCGTCCCAGGTGGGGGGCCGAGCCCTAGTGTTCACG
AGACGACACGGGGTGCTGCTGCTACGGACCGCCGACCCCGCGGCTCAACATCATGCACCG
TCGCTGTGCGACAGTCCTCTCGGCTCCCCGTGTCCCTCGGACGTGTTCGACGGGAACTTG
ACGCTGTACGAGATCGACCCGAACGAGGTGGTGGCCATAAGCGGTGACGCGGTGGGCAAG
TTGAAGAGTGCGTTCCTGTACCACGTCCGCGGCCAGCAGGCCTCCGCCGCTGCCCTGTTG
TCGGAGCTGGCCGGGAGACTCGACCCCTCCGCCACGGACCGGCCTCTGGATCGGACCGTG
GTCACCGTTACCCGGGAAATGCTGGACGACGCGCCGGCCGGGGACCCCAGGTGGAAGCTC
CCCAGTGGCGCGGCGACCCGCGTGTCCCTGGGCAGCTCGTGCTCGCTACAGGCGGCCGCC
CAGCTCCACGACAAACAGAAGGTCTATAACATGTTCCTGGATTTCCTGAGGAGCCGCGGA
CTGTGGAGGCGCCTGGGGACCGTCACCGGGGAGAACGGCGAGGGCGTGTCCAGCACGCAG
CACGAGGTGTGCGCGCTAGGAGAGCGGCTGGCGGCGGCCCGCGCGTTGCAGAGGCTGCAC
CAGGCGGGTGCTCCCCTTGTGGACGCGGCGCTGCACCAAGTGGCGGCTGGACTGGAGCGC
GCGCCCGGCCATGAGGACGAGGCCGTGTTGGAGGCACTCCGAGGCGGCGCACTATCCGCG
GCCGACGTGTGCTGGCGGCGCGTGTCGCGAGTGCTGCGCGTGCTGACTGCGCTGTGTTCC
CTGCCGCCGCCGCCGCACGACGCTCGCGCCGCCGCCTCGCACGCGCACCACGCGCTGGTC
GCCGTCAACTCGGTGATGAGCGCGATGCAGGCGTACCGCTCTCAATGTGACGCCGCCCCG
CCCCGCGCCGCTCCGTCCCTGGCGCCGCACGCCCTGCTCCCATCCCTGTGCTCGCTGCAC
ACCCGCGCCGTCACTGAGTGTGCTCGCAAGTGTCCCGATGCGTCGCTCCGTTCTCAACTG
CTGGAAGAGGCGTCATCGCTGGCTCGCTCCATCCTCCTGGAGGCGGAACCCCTGGCCGAG
GGTCGCACGGCACATCTATACGAGAAGATGCGCTCCGACACCATACAGCCCTACCTCGCC
GAGGGCCAGGCGGAGCGAGCGGCGGTGCTGGCGGAGAAGTTCAAGGACTTCGAGCTGTTG
ATACAGATGTGTGTGGACAAAAACGACCTGGAGAGGCTGGACGGGTACATGGACAAGTAC
GAGGACGAGGGATTCCCAGAGAAGACGTTCGCCTGGCTGGCGTCCCGCGGGGGTCGCATG
TGTGCGTTGCTGGTGAGGTCGGTGGGGGCCCGCGTCCCTCGGCGCCTGGAGTCCTGGCTG
GCCGCCGCGCCCGACCGCCTCACCCTCAGGACCGTCCACGCTCTGGCACGGGGAGAGCTC
GACCTCGCCACGGAGCTGTTCGCCCAGCTCGCGGATAACGAAAATGTTTACGTCAACAGA
ATGGCGACGGCGGCCTCGTTGTCCAAGCTGTGCTCGCTGGCCGGCGGGTCGCAGGAGGCC
GCCAGCCGCGTCTGTCGCGCCTTCAGCGTCGTCCGCCAACACCGCGCCCTGCCCGCCGCC
CTCACCCGGAGACACGCGCTCGACCAACACGAACCCAAACTGTTCACTCCCGAGGAGCTC
ATACAGATGTACATTGAGTCCGAGAGTCGCTCGCTGACGGAATACGACTACAAGAAGGCG
CTCGACCTGACGGAGCTGGTCACAGACCTGGAGCGGAGAGACGACCTGCGGCTGAAGATC
TGGTGCGCGTGTATCCGTCAAGACGACTGGTCGCGCAGCCGCGTGGACGCGCCGGAGCTG
GAGATGAAGGACAAGATGTTCTTTAGACTCCTCGACCTCGTGCATCTCATGGAGCCGGGC
TCCGCTCAAGTAACTGCAGCTCGAACGTGGGCTGGCTCGACCGGGGCAGGACCACCCTCT
CACAGGCGATCGGCGTCAAGTGGAGAGCTGGACGCGGTGCTGCCGCCGCTGGAGGCCGTG
GTGTCGGCCCCCGAGCTGGAGTCGCTGGCGGCCGACCCGCGCGCCCTCTACCTCCTCAAG
TACGGCTACCAGTGTGTGGCGACACAACACGACGACCAATAG
Protein sequence:
MEFNSTGGMRSPFSPRVRQSISGRRPIGLGSAKKNSKFMQQSEQQTGEIVYKTPFTTLET
FGTPLPVMVTETLTFPSSEVSVRLSSCGWCWAVCGRKVLAWPWDTSLPAATARDLTLPQT
DLAHKADLVVLFYENDAQLPSCIGVSPEGVVRYWSSVGAEGASCDVSCELAGQECDRLIQ
ARDGLLLATTTCTLVRITTTKEARPSVVCHTLRPPSGWLGGLGRRVSVLFFGSMPANHDT
KLVKVVLLSSPRADEQAADKECVALVAGGPLVQLWEDGDVREVSLRRPLCDALARTHLAP
AGELSGLEVAALDAEPHPGGGLLLLLLLTVAAPRAPDARYALAHVSLESEERVRVLSAWC
VRGARSESLPRCLPLQPPLVYNSDAIIGVARTDHSTLSLSPGLHRHTTCRAFIIGHSKTF
AETFVSEASGKDQADVLEVSAEGDSILGASQVGGRALVFTRRHGVLLLRTADPAAQHHAP
SLCDSPLGSPCPSDVFDGNLTLYEIDPNEVVAISGDAVGKLKSAFLYHVRGQQASAAALL
SELAGRLDPSATDRPLDRTVVTVTREMLDDAPAGDPRWKLPSGAATRVSLGSSCSLQAAA
QLHDKQKVYNMFLDFLRSRGLWRRLGTVTGENGEGVSSTQHEVCALGERLAAARALQRLH
QAGAPLVDAALHQVAAGLERAPGHEDEAVLEALRGGALSAADVCWRRVSRVLRVLTALCS
LPPPPHDARAAASHAHHALVAVNSVMSAMQAYRSQCDAAPPRAAPSLAPHALLPSLCSLH
TRAVTECARKCPDASLRSQLLEEASSLARSILLEAEPLAEGRTAHLYEKMRSDTIQPYLA
EGQAERAAVLAEKFKDFELLIQMCVDKNDLERLDGYMDKYEDEGFPEKTFAWLASRGGRM
CALLVRSVGARVPRRLESWLAAAPDRLTLRTVHALARGELDLATELFAQLADNENVYVNR
MATAASLSKLCSLAGGSQEAASRVCRAFSVVRQHRALPAALTRRHALDQHEPKLFTPEEL
IQMYIESESRSLTEYDYKKALDLTELVTDLERRDDLRLKIWCACIRQDDWSRSRVDAPEL
EMKDKMFFRLLDLVHLMEPGSAQVTAARTWAGSTGAGPPSHRRSASSGELDAVLPPLEAV
VSAPELESLAADPRALYLLKYGYQCVATQHDDQ