| New model in OGS2.0 | DPOGS214769 |
|---|---|
| Genomic Position | scaffold43:+ 158841-159980 |
| See gene structure | |
| CDS Length | 1140 |
| Paired RNAseq reads | 198 |
| Single RNAseq reads | 604 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000173 (2e-09) |
| Best Drosophila hit | ankyrin, isoform F (4e-20) |
| Best Human hit | ankyrin repeat domain-containing protein 27 (2e-39) |
| Best NR hit (blastp) | putative VPS9-ankyrin repeat-containing protein [Bombyx mori] (4e-157) |
| Best NR hit (blastx) | putative VPS9-ankyrin repeat-containing protein [Bombyx mori] (9e-158) |
| GeneOntology terms | GO:0005764 lysosome GO:0005096 GTPase activator activity GO:0005737 cytoplasm GO:0005769 early endosome GO:0005515 protein binding GO:0005085 guanyl-nucleotide exchange factor activity GO:0045022 early endosome to late endosome transport |
| InterPro families | IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain |
| Orthology group | MCL16641 |
Nucleotide sequence:
ATGGGAGCCGAGATAAATGCAACTGATCTCAATGAATGCACGCCTTTACACTATGCCGCT
TCTAGAGGCCATCAAAACGCTTTACTTCTACTGCTGCATTCAGGATCGAATATAAATAAA
ACTAGCGTTGATAAAAACACACCATTGCACATGGCAGTCAACAACGGACATTTGAATTGT
GTAAAGGCTCTTATTTACTTTGCGGAACATGGTAGGAAGAAACTGAACGTTAATCCCAAA
AATGAATTAGGCAACACTCCTCTCCACCTTGCCTCTAAATGGGGATACGAAGGTATAGCG
AAATTATTGATAGAAAATGGCGCTGAGCCATCGATCCAGAATGACCATAACAAAACTGCT
TTCGATTATGCCCATAATTTGAAAATACTCCAGGTTCTGAAGTCTTGTACGCCTAATTTA
TACGAATACATACATATATCGAACTCTGACATCAAAACACTGAACTGCAAGCCTGAAAAT
CCTGTAACATTGAAGCTACAAAATCTCAAGATAAAGAACTATGAAACGAGTAATGCCTCC
AAAATGGTGGAGAATCTCAAGAGAATCGAGAGGATCTTGCAAGCTATATCATATGGGGAT
GTCAAACTTGCCTGTTTCTATATGAACATTAATTACGATAATTATGTTAATATGAAAAAT
TTTACCGCCAAAGTGAACTGTCATCCTCTTTGCGAGTGTTACAATTGTAAAAAGAAACAT
TACACTATTACCGATTATGACGTAAATTTTGCCGATTCAAATGGTTTCACTGCATTACAT
TACGCTGCTATGTACGGTTTGGATGAGTTGTGCAATATTCTTGTTTTGAACAAGGCTGAT
ATTAATTTTTGCAATAAAAAGGGGCAAACACCCTTACATATGGCAACTATACATAATAAA
ACTACTGTGATAAAATTTCTATTGGACCAGGGAGCAAATATAAATGCTATAGACCTATTT
GGCAACACCGCTCTACATGATGCAAGCGAGATGGGAAATATAGGTGCAACAAAGGCCCTA
CTAAATTACAACCCGGACATAACAATGTCGAATACATCTGATAAAACAGCAATAGATGTC
GCTAAGGACAAACTTCACTTGACAGTTATAGATTTAATAGAAAAACATTCAAATACGTAA
Protein sequence:
MGAEINATDLNECTPLHYAASRGHQNALLLLLHSGSNINKTSVDKNTPLHMAVNNGHLNC
VKALIYFAEHGRKKLNVNPKNELGNTPLHLASKWGYEGIAKLLIENGAEPSIQNDHNKTA
FDYAHNLKILQVLKSCTPNLYEYIHISNSDIKTLNCKPENPVTLKLQNLKIKNYETSNAS
KMVENLKRIERILQAISYGDVKLACFYMNINYDNYVNMKNFTAKVNCHPLCECYNCKKKH
YTITDYDVNFADSNGFTALHYAAMYGLDELCNILVLNKADINFCNKKGQTPLHMATIHNK
TTVIKFLLDQGANINAIDLFGNTALHDASEMGNIGATKALLNYNPDITMSNTSDKTAIDV
AKDKLHLTVIDLIEKHSNT